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SCNpilot_expt_500_bf_scaffold_812_21

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(14059..14328)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, CopG family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVM1_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 80.0
  • Bit_score: 88
  • Evalue 3.20e-15
Transcriptional regulator, CopG family {ECO:0000313|EMBL:KGB58977.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 89.0
  • Bit_score: 89
  • Evalue 2.60e-15
CopG family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 80.0
  • Bit_score: 88
  • Evalue 1.00e-15

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGATGCGACTTCTCCCATTTCGGCCCGCGTGGACGCGACGACGCTAAACGATCTCGATCGACTTGCAGAACGCTATGATCGCTCGCGGTCATGGCTCGTAGCGCAAGCCGTTCGCGAATATGTCGACAGGGAAACCGAATTTCTGGATTTCATCAAAGCCGGCGAGGACGACATCGCAAAAGGGAATGTAGTCAGCCAGGCGGAGATTGAGGCCTGGTTTGAAGCGCGCATTGCACAACACAACCGGAACGCGTCGGCCAAATCGTGA
PROTEIN sequence
Length: 90
MDATSPISARVDATTLNDLDRLAERYDRSRSWLVAQAVREYVDRETEFLDFIKAGEDDIAKGNVVSQAEIEAWFEARIAQHNRNASAKS*