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SCNpilot_expt_500_bf_scaffold_1241_5

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 5997..6866

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNU3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 255.0
  • Bit_score: 517
  • Evalue 1.20e-143
TonB-dependent receptor {ECO:0000313|EMBL:ENY80110.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 255.0
  • Bit_score: 517
  • Evalue 1.60e-143
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 255.0
  • Bit_score: 404
  • Evalue 3.50e-110

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
TTGCAACGGCGGGGCTGCGTTACTCGCACGCACGCCTGGGCGGAAGCGGCGAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCTTCGCCATTCTCGCTCGGCCGCTATCGAACCTGACGCTTTATGCGCGGTATCAGGAGGGGTTTCGGCCCGGCGGCCTTGCCGTCGACGGCAATTTCGTCCGCCGCTATCGCAACGACCGGGTTCATACGTGGGAAGGCGGCATAAGGCTTGGCGAGCGCGGCCGCACTCCGTTCGATGCCAATATCTCCGTATCGCACACACGCTGGTTCAACATTCAGGCTGATTTCATCGACGGCAATGGCTTTCCGACGACAGCCAACATCGGCGACGGGCGCATCACCAGCATCTCGGGATCGCTCGCCGTCCGCGTGACGCCCACCCTCTCCTTCGATCTGGGCGCGGTTTATAACCATAGCCGCGTCGATGATCTGGCACCCCAAATCGCGCTGGTTGCCGATTTTGCTCCGGGCCGGCTGGGGCGGATCCCCAATGTCGCAAGCCATGCGGTGCGCGGAGCGATCACCTATGCGGCGCCCGTCGGCGACGACGAGGAAATCCGGATCAACGGCTGGGCCAACTATATCGGACCGTCGCGGCTCGGGATCGGGCCGGTGCTTGGCGAAGGCCAGGGCGATTATGTCGATACCGGCCTTGCGATGCGGCTCGGCAACGGGCGGCGCGGCCTGTCGGTGACGCTGACCAATCTGCTCGATTCAAAAGGGAATCGGTTCGCGCTCGGCACGCCCTTTGTCGAGGGGAGCCCCGGCTATCTGACACCGCTGCGGCCGCGGACGCTGCGGGTCGCCGTCGACATCGCTTATTGA
PROTEIN sequence
Length: 290
LQRRGCVTRTHAWAEAAKXXXXXXXXXXXXXXXXSFAILARPLSNLTLYARYQEGFRPGGLAVDGNFVRRYRNDRVHTWEGGIRLGERGRTPFDANISVSHTRWFNIQADFIDGNGFPTTANIGDGRITSISGSLAVRVTPTLSFDLGAVYNHSRVDDLAPQIALVADFAPGRLGRIPNVASHAVRGAITYAAPVGDDEEIRINGWANYIGPSRLGIGPVLGEGQGDYVDTGLAMRLGNGRRGLSVTLTNLLDSKGNRFALGTPFVEGSPGYLTPLRPRTLRVAVDIAY*