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SCNpilot_expt_500_bf_scaffold_2521_17

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(14866..16287)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, Fis family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W8X3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 473.0
  • Bit_score: 914
  • Evalue 4.10e-263
  • rbh
Two component, sigma54 specific, Fis family transcriptional regulator {ECO:0000313|EMBL:ENY80128.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 473.0
  • Bit_score: 914
  • Evalue 5.80e-263
two component, sigma54 specific, Fis family transcriptional regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 476.0
  • Bit_score: 765
  • Evalue 7.40e-219
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGACCATCGACAAGACGATCCTGCTGGTCGAGGACGATCCCGCGATCTCGCTCATCATCCGCGAGACGCTGGGCGACGAATGCGCGCTGTTCGCCGCGGTCGGCAGCATCGCCGAGCGCAACGCCTGGCTCGCCGATCATCGCCCCGACCTCATCATCACCGACGTCGTCCTGCCCGACGGCGACGGCATCGATTCGCTGCCCGGCGCGGGCGTGGCGCCCGAAACACCGGTGATCGTTCTCTCGGCGCAGAACACGCTCGACACCGCGGTCCGCGCGCAGGGGATCGGCAGCTACGACTATCTGCCCAAGCCCTTCGATCTCGAGGAGTTGACCGCCAGCGTCCGCGCTGCGCTGGCGCGGGGCCGGCAACCGCTCGCCAAGGTCGATGCGGCCGAAACCGACAGCCACGGGCTGATCGGCCGCGCCCCCGCGATGCAGGCGGTTTATCGCACCATCGCGCGGCTCGCCTCGAACGACCTAGCGGTCCTGATCCTCGGCGAATCGGGGACGGGCAAGGAGGTTGTGGCGCGCGCGATCCATGCCACGGGCCTGCGCCGCAACGGCCCCTTCGTCGCGATCAACATGGCGGCGATCCCGCGCGAATTGATCGAGGCCGAACTGTTCGGCCACGAAAAGGGCGCTTTCACCGGCGCGCACAGCCGCAGCGCCGGGCGGTTCGAACAGGCGTCGGGCGGCACCCTGTTCCTCGACGAAATCGGCGACATGCCGCTCGAGGCGCAGACGCGGCTGCTGCGCGTCCTGCAAACCAACGAATATTCGACCGTCGGCGGCAGTCAGGCGCTGAAAGCCGATGTCCGCGTCGTCGCCGCGACCCACCGCGAGATGCGCAGCCTCGTCGCAGAGGGGCGCTTCCGCGAAGATCTTTTCTACCGCCTCAACGTCATTCCGGTCAGCCTGCCGCCGCTGCGCGACCGGCGCAGCGACATCGCCGCGCTCGTCCGCCATTTCGTCGATACCGGGCGCCAGTCGGGACTGCCCGACCGCGAATTCGCGCCCGAGGCGATGCAGTTACTCGAACGCCACGACTGGCCGGGCAATGTCCGCGAACTCGGCAATGTCGTCCAGCGCCTCGCCATTCTGGCGCGCGACGCCGTCGTCACCGCCCGCGATGTCGAGACGGTGCTGCGCGAAAGCGGCGGCATGGCGCCCGCCTTCACCGCGCCGGCGGACCTGATCGCGCACGCGGTCGACGATTGGGTGCGCGAACGGCTGGCGGGTACCGACGGCGACGGCGCCATCCACAGCGACCTCGAAGCCATCGTCGAGGCCGCGCTTTTCCGCCGCGTGCTGCGCGAAGTACGCGGCAACCAGCTCGAGGCAGCCCGACGGCTCGGGATCAACCGCAACACGCTGCGCAAGCGATTGGGGCAACTCGACATCGATCCCGCGCATCCCTAG
PROTEIN sequence
Length: 474
MTIDKTILLVEDDPAISLIIRETLGDECALFAAVGSIAERNAWLADHRPDLIITDVVLPDGDGIDSLPGAGVAPETPVIVLSAQNTLDTAVRAQGIGSYDYLPKPFDLEELTASVRAALARGRQPLAKVDAAETDSHGLIGRAPAMQAVYRTIARLASNDLAVLILGESGTGKEVVARAIHATGLRRNGPFVAINMAAIPRELIEAELFGHEKGAFTGAHSRSAGRFEQASGGTLFLDEIGDMPLEAQTRLLRVLQTNEYSTVGGSQALKADVRVVAATHREMRSLVAEGRFREDLFYRLNVIPVSLPPLRDRRSDIAALVRHFVDTGRQSGLPDREFAPEAMQLLERHDWPGNVRELGNVVQRLAILARDAVVTARDVETVLRESGGMAPAFTAPADLIAHAVDDWVRERLAGTDGDGAIHSDLEAIVEAALFRRVLREVRGNQLEAARRLGINRNTLRKRLGQLDIDPAHP*