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SCNpilot_expt_500_bf_scaffold_2521_20

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(17956..18360)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 134.0
  • Bit_score: 247
  • Evalue 1.10e-62
tRNA-dihydrouridine synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNW5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 134.0
  • Bit_score: 247
  • Evalue 8.00e-63
dihydrouridine synthase TIM-barrel protein nifR3 similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 134.0
  • Bit_score: 244
  • Evalue 2.10e-62

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGGCGCCGCTGCGGCCCATCCAGATCGGCAATATCACCATCGCGGATCCCGTGATCCTCGCGCCGATGACGGGCGTGACTGATCTGCCGTTCCGCAAGATCGTCCGCTATTACGGCTCGGGGCTCAACGTCACCGAGATGATCGCGAGCCAAGCCGCGATCCGTGAGACGCGGCAATCGATCCAGAAAGCCGCCTGGGATCCGGTCGAGGAGCCCGTTTCGATGCAGCTTGTCGGCTGCACGCCTTATGAAATGGGCGAGGCCGCGAAGCTCAACGAAGAACGCGGCGCGGCGATCATCGACATCAACATGGGTTGTCCGGTCCGCAAGGTGACGAACGGCGATGCCGGATCGGCGCTGATGCGCGAATCGAAGCCTGCGTCAAGGCGGTCAGCGTGCCGGTGA
PROTEIN sequence
Length: 135
MAPLRPIQIGNITIADPVILAPMTGVTDLPFRKIVRYYGSGLNVTEMIASQAAIRETRQSIQKAAWDPVEEPVSMQLVGCTPYEMGEAAKLNEERGAAIIDINMGCPVRKVTNGDAGSALMRESKPASRRSACR*