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SCNpilot_expt_500_bf_scaffold_2521_22

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 19603..20160

Top 3 Functional Annotations

Value Algorithm Source
CinA-like protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GTM9_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 185.0
  • Bit_score: 301
  • Evalue 6.50e-79
  • rbh
CinA-like protein {ECO:0000313|EMBL:KGB51408.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 185.0
  • Bit_score: 310
  • Evalue 2.00e-81
CinA-like protein; K03743 similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 185.0
  • Bit_score: 301
  • Evalue 2.00e-79
  • rbh

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
TTGCCGTCCGCCGTCGAAACGCGCCAGACCGCGCGCGAAGAAGCCGCCACGTCCGTTCTTGCCGCCAATCGCGCGGCGGGGCGCCGCGTTGCCATCGCCGAAAGCTGCACCGGCGGCATGGTGTCGGTGGCGCTCACTGACATTCCCGGTAGTTCCGATGTCTTCAGCGCCGGATTCATTACCTATTCGGCCGACGCCAAGAAGCGCCAGCTCGACGTCAGCAGCGAAATTCTGGAAACCTTCGGCGAGGTGTCGCTGGCGACCGCCTGGGCCATGGCCGCGGGCGTGCTGGCGAACAGCGATGCCGACGTTGCGGTGTCGATCACCGGCATCGCGGGTCCCGGCGGCGGATCGGATAAGAAACCGGTGGGCATCGTCGTGTTTGCGCGCGCGCTGCGCGGCCAGGACCCCGATGATTATTTCACCCAGCGGGTGCAGTTCGATTCGACCGATCGCGCGACGACCCGCCATCACGCGACGATGTTCGCGCTCGACCTGCTTCAGCCCGACAAGGACGCGCTGCGTCCGTCGGAGGATGTCACGCTTCCCGCACCGTAA
PROTEIN sequence
Length: 186
LPSAVETRQTAREEAATSVLAANRAAGRRVAIAESCTGGMVSVALTDIPGSSDVFSAGFITYSADAKKRQLDVSSEILETFGEVSLATAWAMAAGVLANSDADVAVSITGIAGPGGGSDKKPVGIVVFARALRGQDPDDYFTQRVQFDSTDRATTRHHATMFALDLLQPDKDALRPSEDVTLPAP*