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SCNpilot_expt_1000_bf_scaffold_695_4

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: comp(3124..3501)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 n=1 Tax=Thalassiosira pseudonana RepID=Q3S295_THAPS similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 124.0
  • Bit_score: 170
  • Evalue 1.20e-39
Ribosomal protein S12 {ECO:0000313|EMBL:AAZ99409.1}; TaxID=35128 species="Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira.;" source="Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 124.0
  • Bit_score: 170
  • Evalue 1.60e-39
rps12; ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 122.0
  • Bit_score: 165
  • Evalue 1.50e-38

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Taxonomy

Thalassiosira pseudonana → Thalassiosira → Thalassiosirales → Coscinodiscophyceae → Bacillariophyta → Eukaryota

Sequences

DNA sequence
Length: 378
ATGCCAACATACCATCAATTAGTTAAAAAACCGCGTATAGCAAAAAAACGTTCACAACGTAGACCCGCATTACAACAAAGTCCACAACGAAAAGGGGTTTGTATTAAATTAGTTATAAGAACACCAAAAAAACCAAATTCAGCCTTACGTAAATTAGCACTTTTACGATTAAGTAATCGTAAACGTATTTATGGGTATATTCCTGGAGAAGGAAAACATAGTTTACAAGAACATTCTGTAGTAATGGTTCGTGGAGGTCGTGTTAAAGATTTACCTGGAATTAAATATAAATTAGTTCGTGGGGTTTATGACTTTGAAGGTTTAAAAGGTCGTAAAAAAGGGCGTTCTAAGTATGGAACAAAAAAAACTTCGGCCTAA
PROTEIN sequence
Length: 126
MPTYHQLVKKPRIAKKRSQRRPALQQSPQRKGVCIKLVIRTPKKPNSALRKLALLRLSNRKRIYGYIPGEGKHSLQEHSVVMVRGGRVKDLPGIKYKLVRGVYDFEGLKGRKKGRSKYGTKKTSA*