ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_expt_1000_bf_scaffold_695_12

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: comp(12660..13538)

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c oxidase subunit 2 n=1 Tax=Cafeteria roenbergensis RepID=Q9TAK4_CAFRO similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 283.0
  • Bit_score: 290
  • Evalue 2.30e-75
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU000457}; TaxID=33653 species="Eukaryota; Stramenopiles; Bicosoecida; Cafeteriaceae; Cafeteria.;" source="Cafeteria roenbergensis (Marine flagellate).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 283.0
  • Bit_score: 290
  • Evalue 3.30e-75
cytochrome c oxidase polypeptide II; K02261 cytochrome c oxidase subunit 2 similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 237.0
  • Bit_score: 251
  • Evalue 3.80e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cafeteria roenbergensis → Cafeteria → Bicosoecida → Eukaryota

Sequences

DNA sequence
Length: 879
ATGGGTTTATTATCAACTTTTGTTATGAACACAAATATTAGCGCAGCAAAAGAATTTTTTGCAGCAACACAAATTCATAACTGACAATTAGGATTTCAAACACCAGCAGCACCAATTTTTGAAGGGATTATTGCGTTCCATGATGATCTTATGCTTTATATTACACTTGTTTGAGGATTCGTTATTTATATTCTTGTAACATGTATTAACCGTTTTGGTGGAAAAGATCGTGAAACCGCACGTTTAACACATGCCTCAACACTTGAAATTATCTGAACACTTATTCCTGCAGCAATTTTAGTAACAATTGCTATTCCATCATTTTCACTTCTTTATTCTATGGATGAAATTGTAGAACCTCTTTTTACAGTTAAAGTAGTTGGACATCAATGATATTGATCTTATGAATTTTTAGATCCTGAAGTTGTAGCACAACTTTATAACGAAGAACTTAGCAATCAACACTTTACATTTGAAACAGAAGGATCTGCAAGCTTTGATAGTTATGCACTTTCAGATGATGAAATCCTTGCTGGAACAGGATTATCTGCAAACCGTTTATTAACTGTAGATAACCATCTTTTTATTCCAACAGCAACAAATGTTCGCGCAATGCTTACATCTAGTGATGTAATTCATAGCTGAGCTATTCCAAGTTTAGGAATTAAATTAGATGCTTGTCCAGGACGTTTAAATCAAGTAGCTGTATTTATTAAACGTGAAGGGCTTTATTATGGACAATGTAGTGAAATTTGTGGTATTAATCATGGATTTATGCCAATTGGTATTGTAAGTTATGAAATTATGCAACCTTCAAAATCTCGTATTGAAGATATTGAACTTTTATTAACATCTTTAGAAGCTGTTGCTGTAGAATAA
PROTEIN sequence
Length: 293
MGLLSTFVMNTNISAAKEFFAATQIHN*QLGFQTPAAPIFEGIIAFHDDLMLYITLV*GFVIYILVTCINRFGGKDRETARLTHASTLEII*TLIPAAILVTIAIPSFSLLYSMDEIVEPLFTVKVVGHQ*Y*SYEFLDPEVVAQLYNEELSNQHFTFETEGSASFDSYALSDDEILAGTGLSANRLLTVDNHLFIPTATNVRAMLTSSDVIHS*AIPSLGIKLDACPGRLNQVAVFIKREGLYYGQCSEICGINHGFMPIGIVSYEIMQPSKSRIEDIELLLTSLEAVAVE*