ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1063_14

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: comp(14270..15196)

Top 3 Functional Annotations

Value Algorithm Source
BI4; Bi4p (EC:3.1.-.-); K00412 ubiquinol-cytochrome c reductase cytochrome b subunit similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 301.0
  • Bit_score: 273
  • Evalue 7.50e-71
Intronic ORF at intron 3 of cox1 protein n=1 Tax=Lentinula edodes RepID=I7HBM2_LENED similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 265.0
  • Bit_score: 329
  • Evalue 2.80e-87
  • rbh
Intronic ORF at intron 3 of cox1 protein {ECO:0000313|EMBL:BAM29318.1}; TaxID=5353 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Omphalotaceae; Lentinula.;" source="Lentinula edodes (Shiitake mushroom) (Lentinus edodes).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 265.0
  • Bit_score: 329
  • Evalue 4.00e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lentinula edodes → Lentinula → Agaricales → Agaricomycetidae → Basidiomycota → Fungi

Sequences

DNA sequence
Length: 927
ATGGCCCCCTTCTTAGTTAAAATTTCAAAAAAGAGCACCCATATTAATAGCCCTATAAATAAATTTCAACAGTCTTATATTGCTATGGGTGCGGGTTGTAATCAGCTGGTAACGAACATTAGAGCCTATGGCTCTTATTTAGTAGGAACCTCAGAGACTACACGCACATCACATTTAGATATTTCCAAGGATTTAAATTTTAATCAATGGTTAGCAGGTTTAATAGATGGTGATGGTTCTTTATTAGTTAGTAAATTGGGTTATTGTAGTTGTGAAATTACTGTTTCCCTTGCAGATGAACGTACTTTAAGAATAATTCAAAATAAATTAGGGGGTTCAGTTAAACTAAGATCAGGTGTAAAAGCTGTTAGATACCGTTTACATCATAGACAAGGTATGTTAGATCTTATTTATCGTATTAATGGTCTTATTCGTCATTCTTCCAGATTTAAACAACTGAATCATGTTTGTTCTACTTTAGGTATAGTATGTAAATTACCTGACACCCTTCATGATAAACATAGTTGGTTAGTAGGATTTTTTGATGCTGATGGTTGTATATCTTATTCTCTAAAAGGCCCTAATAAAATACCACAACTTACCATCAGCGTTACCAATAAATTGTTAACAGATGTTCTTCCTTTTAGTTATGTTTTTGGAGGTAATATTTATTATGATCGTAGTCAAAATGGTTATTATAAATGGTCCGTTCAAAGTAGAGAATCTCTATTCAAAATGCTAACTTATTTTAAAGTATGTCCATCTTTTACTATTAAATCTCACCGTATACATTTAATTCCTGAATTTTTCTCTCTTATAGATCTTAAAGCTTATTCTGCTCCCACTAATTCTTCATTACATGTAGCTTGGGTTAAGTTTAATCATAAATGGAATTCTAAATGTGAAGATATAGTCCAAACGATTTAA
PROTEIN sequence
Length: 309
MAPFLVKISKKSTHINSPINKFQQSYIAMGAGCNQLVTNIRAYGSYLVGTSETTRTSHLDISKDLNFNQWLAGLIDGDGSLLVSKLGYCSCEITVSLADERTLRIIQNKLGGSVKLRSGVKAVRYRLHHRQGMLDLIYRINGLIRHSSRFKQLNHVCSTLGIVCKLPDTLHDKHSWLVGFFDADGCISYSLKGPNKIPQLTISVTNKLLTDVLPFSYVFGGNIYYDRSQNGYYKWSVQSRESLFKMLTYFKVCPSFTIKSHRIHLIPEFFSLIDLKAYSAPTNSSLHVAWVKFNHKWNSKCEDIVQTI*