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SCNpilot_expt_1000_bf_scaffold_1578_12

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: comp(10897..12291)

Top 3 Functional Annotations

Value Algorithm Source
rimO; ribosomal protein S12 methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 463.0
  • Bit_score: 802
  • Evalue 5.40e-230
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000255|HAMAP-Rule:MF_01865}; Short=S12 MTTase {ECO:0000255|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000255|HAMAP-Rule:MF_01865};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000255|HAMAP-Rule:MF_01865}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 463.0
  • Bit_score: 802
  • Evalue 2.40e-229
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RIMO_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 463.0
  • Bit_score: 802
  • Evalue 1.70e-229

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1395
ATGGCAACCCTTATCCCCGATGCCCGCTTGATCCCCGACGCGAAGAAGGTCGGCATGGTCAGCCTGGGCTGCCCCAAGGCGCTCGTCGATTCCGAGCGCATCCTGACGCGCCTGCGGGCCGACGGCTATGCGATGAGCGCCGACTACGCGGGCGCCGACGTGGTCCTGGTCAACACCTGCGGCTTCCTCGATTCCGCCAAGGAGGAAAGCCTCGCCGCGATCGGCGAGGCGATCGCCGAGAACGGGCGGGTGATCGTCACCGGCTGCATGGGCAGCGAGGCCGAGGCGATCCGGGCGCGGTTCCCGGCGGTCCTCGCCGTCACCGGCGCGCACCAGTACGAGGCGGTCGTCGAGGCCGTGCACGAGGCCGCGCCGCCGAGCCAGGGTCCCTTCGTCGACCTCATCCCCCAGCCCGTCGATGCCGATATCAAGCTGACCCCGCGTCATTACAGCTATCTAAAGATTTCAGAGGGTTGCAACCACTCCTGCGCCTTCTGCATCATCCCCCAGCTCCGCGGCAAGCTGGCCAGCCGGCGGATCGACGCCGTGCTGCGCGAGGCGGAGAAGCTGGTCGCCGCCGGCACCCGCGAGCTGCTGGTCATCAGCCAGGACACCTCGGCCTACGGCGTCGACATCCGCCATGAGGAGCGGATGTGGCACGGCTATCCGGTCCGCGCCCACATGACCGACCTCGCCCGCGAGCTTGGCCAGCTCCGCACGCCCGAGGGCGCGCCGCCCTGGGTGCGGCTGCACTACGTCTATCCCTATCCGCACGTCGACGCGGTGATCCCGCTGATGGCCGAGGGGCTGCTGACGCCCTACCTCGACATTCCCTTCCAGCACGCCTCGCCCAAGGTCCTGCGGGCGATGAAGCGCCCGGCGAACGAGGCCAGGGTGCTCGACCGGCTGCGCGACTGGCGGAGCATCTGCCCCGACATCGCCATCCGCTCCAGCTTCGTCGTCGGCTTCCCCGGCGAGACCGAGGAGGACTTCCAGTACCTGCTCGACTGGCTCGACGAGGCCCAGCTCGACCGGGTCGGCGCCTTCCGCTTCGAGCCGGTGGCCGGCGCCGGCGCCAACGACCTGCCCGATCCCGTGCCCGAGGCGGTCAAGGAGGAGCGCTTCGCCCGGATCATGGCCCGGACCGAGGCGATCAGCGCGGCCAAGCTCGCCGCCAAGGTTGGCCGCGTCCTGCCGGTGATCGTCGACGAGGTCGGCGAGCCCGACGAGGACGGCGACATCGGCGCCACGGGCCGCAGCCAGGCCGATGCTCCGGAGATCGACGGCGCCGTCTTCCTCCGCAACGTCGCCCCGACGCTCAAGCCCGGCGACATCGTCGACGTGCTGGTCGAGGATTCCGACGCCCACGACCTGTTCGGGGTGCCGGCGGCCTAG
PROTEIN sequence
Length: 465
MATLIPDARLIPDAKKVGMVSLGCPKALVDSERILTRLRADGYAMSADYAGADVVLVNTCGFLDSAKEESLAAIGEAIAENGRVIVTGCMGSEAEAIRARFPAVLAVTGAHQYEAVVEAVHEAAPPSQGPFVDLIPQPVDADIKLTPRHYSYLKISEGCNHSCAFCIIPQLRGKLASRRIDAVLREAEKLVAAGTRELLVISQDTSAYGVDIRHEERMWHGYPVRAHMTDLARELGQLRTPEGAPPWVRLHYVYPYPHVDAVIPLMAEGLLTPYLDIPFQHASPKVLRAMKRPANEARVLDRLRDWRSICPDIAIRSSFVVGFPGETEEDFQYLLDWLDEAQLDRVGAFRFEPVAGAGANDLPDPVPEAVKEERFARIMARTEAISAAKLAAKVGRVLPVIVDEVGEPDEDGDIGATGRSQADAPEIDGAVFLRNVAPTLKPGDIVDVLVEDSDAHDLFGVPAA*