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SCNpilot_expt_1000_bf_scaffold_1973_2

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: comp(737..2407)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 553.0
  • Bit_score: 981
  • Evalue 5.90e-283
2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 556.0
  • Bit_score: 959
  • Evalue 5.40e-277
  • rbh
2-isopropylmalate synthase n=1 Tax=Novosphingobium sp. AP12 RepID=J3AAN0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 555.0
  • Bit_score: 970
  • Evalue 9.70e-280
  • rbh

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1671
ATGCCCATGCTGAAAGACCCCTCGGTCAAGTACCGGCCCTTCCCGCCGATCAACCTGCCCGACCGCCAGTGGCCCTCGCGCGTCATCGAGCGCGCGCCGCGCTGGCTCTCCACCGACCTCCGCGACGGCAACCAGTCGCTGATCGTCCCGATGGGCGCGGAAAAGAAGACCCGCTTCTTCGACCTCCTGGTCAAGATCGGCCTCAAGGAGATCGAGGTCGGCTTCCCTGCCGCCGGGGCGACCGAGTTCGACTTCATCCAGGGCCTGGTCAAGGGCGGACGGATTCCCGACGACGTGCTGGTCCAGGTCCTGACCCAGTCGCGCGAGGACCTGATTCGGACCTCGTTCGAGAGCCTGGAGGGCGCCCGCGCGGCGATCGTCCACCTCTACAACGCGGTCTCGCCGCTGTGGCGCACGGTCGTCTTCGGCATGGAGCAGGCCCAGATCAAGGAGATCGCGGTGGCCGGCGCCAAGGTCCTGCGCGACCAGGCCGCCCGCTTCCCCGGCACCGACTGGCACTTCGAATACAGCCCGGAGACCTTCTCCACCGCCGAGCTCGATTTCAGCCTGGAATGCTGCGAGGCGGTGATGGACGTGCTGCGCCCGACGCCGGAGCATCCGATCATCCTCAACCTGCCGGCGACGGTCGAGGCGGCGACGCCCAACGTCTATGCCGACCAGATCGAGTATTTCTGCCGCAACCTGCCCAATCGCGAGTCGGCGGTGATCTCGCTCCACACCCACAACGACCGCGGCACCGGCGTCGCCGCGGCGGAGCTGGGGCTGATGGCCGGGGCCGACCGCGTCGAGGGCTGCCTGTTCGGCAACGGCGAGCGCACCGGCAATTGCTGCCTGGTAACAGTCGGCCTCAACTTGTACACGCAAGGCGTTGATCCAAAGCTGGATTTCTCCGACATCGACGAGATCATCCAGACGGTCGAATACTGCAACCAGTTGCCCGTGCCGGAGCGCCATCCCTATTCGGGCGAGCTGGTCTTCACCGCCTTCTCGGGCTCGCACCAGGACGCGATCAAGAAGGGCTTCGCCGCGCAGGAGCAGCGCAACGACCAGCTCTGGGCCGTGCCCTACCTGCCGATCGACCCGGCCGACCTGGGCCGCACCTATGAGGCGGTGATCCGGGTCAACTCGCAGTCGGGCAAGGGCGGCTTCGCCTGGGTGATCGAGCAGGATCAGGGCCTCAAGCTGCCCAAGCGGATGCAGGCGCACTTCTCCAAGCACGTCCAGGAGCTGGCCGACGAGCTGGGCCGCGAGTTGCAGGCGGGCGACATCTGGGACGTGTTCCAGCGCGTCTATCACCTGGGCGGGGCCCAGCACTTCCAGCTCGTCGACTACGAGGAGAGCAAGGGCCCCGACGGGACCCGGATCTTCGCCGGCCGGATCGGCGTGGGCGGCAAGGAGCAGTCGGTCTCGGGCCGGGGCAACGGCCTGATCTCGTCGATCCTGGCGACGCTCAAGGACGCCTTCGGGGTCGAGCTGGAGGGCGACTATTCCGAGCACGCGATGACCGCCGGCACCGACGCGCGCGCCGCCGCCTATGTCGAATGCACCGCGCCGGACGGCCGCACCGTCTGGGGCGTCGGCATCGACGAGGACGTCGCCACCGCCAGCGTCCGCGCCGTGCTCAGCGCGGCCAACGCGGTCGCGGGCTAG
PROTEIN sequence
Length: 557
MPMLKDPSVKYRPFPPINLPDRQWPSRVIERAPRWLSTDLRDGNQSLIVPMGAEKKTRFFDLLVKIGLKEIEVGFPAAGATEFDFIQGLVKGGRIPDDVLVQVLTQSREDLIRTSFESLEGARAAIVHLYNAVSPLWRTVVFGMEQAQIKEIAVAGAKVLRDQAARFPGTDWHFEYSPETFSTAELDFSLECCEAVMDVLRPTPEHPIILNLPATVEAATPNVYADQIEYFCRNLPNRESAVISLHTHNDRGTGVAAAELGLMAGADRVEGCLFGNGERTGNCCLVTVGLNLYTQGVDPKLDFSDIDEIIQTVEYCNQLPVPERHPYSGELVFTAFSGSHQDAIKKGFAAQEQRNDQLWAVPYLPIDPADLGRTYEAVIRVNSQSGKGGFAWVIEQDQGLKLPKRMQAHFSKHVQELADELGRELQAGDIWDVFQRVYHLGGAQHFQLVDYEESKGPDGTRIFAGRIGVGGKEQSVSGRGNGLISSILATLKDAFGVELEGDYSEHAMTAGTDARAAAYVECTAPDGRTVWGVGIDEDVATASVRAVLSAANAVAG*