ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2322_2

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: 1296..2240

Top 3 Functional Annotations

Value Algorithm Source
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 314.0
  • Bit_score: 580
  • Evalue 1.70e-162
isocitrate dehydrogenase (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 313.0
  • Bit_score: 572
  • Evalue 6.10e-161
isocitrate dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B61EA6 similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 314.0
  • Bit_score: 586
  • Evalue 1.30e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGTGGAAGTCGCCCAACGGCACGATCCGCAACATCCTCGGCGGCGTGGTCTTCCGCGAGCCGATCGTGATCTCGAACGTCCCCCGCCTGGTGCCGGGCTGGACCGATCCCATCGTCATCGGCCGCCACGCCTTCGGCGACCAGTACCGCGCCACTGATACCCTGATCCCCGGCCCGGGCACCCTGCGCCTGGTCTTCGACGGCGAGGACGGCCAGACCCTCGACCTCGAGGTGTTCAAGTTCCCCAGCGCCGGCGTCGCCATGGCGATGTACAACCTCGACGATTCGATCCGCGACTTCGCCCGCGCCTCGATGAACTACTCGCTCAACCTCGGCTGGCCGCTGTATCTCTCCACCAAGAACACGATCATGAAGGCCTATGACGGCCGCTTCAAGGACCTGTTCGAGGAGGTCTACAACAACGAGTTCAAGGCGCAGTTCGAAGCCGCCGGCATCACCTACGAGCACCGCCTGATCGACGACATGGTCGCCTCGGCGCTCAAGTGGTCGGGCAAGTTCGTCTGGGCCTGCAAGAACTACGACGGCGACGTCCAGTCGGACACCGTGGCCCAAGGGTTCGGCTCGCTCGGCCTGATGACCTCGGTGCTGATGGCCCCCGACGGCAAGACCGTCGAGGCCGAGGCCGCCCACGGCACCGTCACCCGCCACTATCGCCAGCACCAGCAGGGCAAGGCGACCTCGACCAACCCGATCGCCTCGATCTTCGCCTGGACCCGCGGCCTGCTCTACCGCGGCAAGTTCGACAATACGCCCGAGGTGGTGAAGTTCGCCGAGACGCTGGAGCGCGTCTGCGTCGAGACCGTCGAGAGCGGCAAGATGACCAAGGACCTCGCGATCCTGATCGGTCCGGACCAGCCCTGGCTGACCACCGAGAAGTTCTTCGAGGCGATCGTCGAGAACCTCGAAAGCGCGATGGCGCAGTAA
PROTEIN sequence
Length: 315
MWKSPNGTIRNILGGVVFREPIVISNVPRLVPGWTDPIVIGRHAFGDQYRATDTLIPGPGTLRLVFDGEDGQTLDLEVFKFPSAGVAMAMYNLDDSIRDFARASMNYSLNLGWPLYLSTKNTIMKAYDGRFKDLFEEVYNNEFKAQFEAAGITYEHRLIDDMVASALKWSGKFVWACKNYDGDVQSDTVAQGFGSLGLMTSVLMAPDGKTVEAEAAHGTVTRHYRQHQQGKATSTNPIASIFAWTRGLLYRGKFDNTPEVVKFAETLERVCVETVESGKMTKDLAILIGPDQPWLTTEKFFEAIVENLESAMAQ*