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SCNpilot_expt_1000_bf_scaffold_2342_5

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: 4405..5823

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 428.0
  • Bit_score: 748
  • Evalue 5.50e-213
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33 4.2.1.35); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 428.0
  • Bit_score: 745
  • Evalue 1.00e-212
3-isopropylmalate dehydratase large subunit n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EEH5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 428.0
  • Bit_score: 748
  • Evalue 3.90e-213

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Taxonomy

Novosphingobium pentaromativorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
ATGTCCGAAAAACCGCGCACGCTCTACGAGAAAATCTGGGACGCCCATGTCGTCGCCCGCCAGGACGACGGCACCTGCCTGATCTACATCGACCGCCACCTGGTCCACGAAGTCACCAGCCCGCAAGCCTTCGAGGGCCTGCGCGCCGCCGGCCGCAAGGTGCGCCGCCCCGACCTCACCCTCGCCGTGCCGGACCACAACCTGCCGACGACCCCGCGCAAGGACGCGGCAGGCAACCGCATTCCCATCGCCGACGCGGAGAGCGCCAACCAGCTCGCCACCCTGGCGAAGAACGCGCCCGCATTCGGCATCCGCTATATCAGCGAGGTCGATCCCGAGCAGGGCATCGTCCACGTCGTCGGCCCCGAGCAGGGCTTTTCCGTGCCCGGCGCGACGATCGTCTGTGGCGACAGCCATACCTCGTGCCACGGCGGCCTGGGGGCGCTGGCCTTCGGCATCGGCACGACCGAGGTCGAGCACGTCCTGGCGACCCAGACCCTGCTGCTCCAGCCGAGCAAGACCTTCGAGGTCCGCGTCGAGGGCAAGCTGGCCCCCGGCGTCACCCCCAAGGACGTGGTGCTCCACGTGATCGGCGTGATCGGCACGGCCGGCGGCACCGGCCACGTCATCGAGTTCTGCGGCAACGTCTTCGAGGAGATGTCGGTCGAGGGCCGCCTGACCGTCTGCAACATGAGCATCGAGGGCGGCGCCCGCGCCGGCCTGGTCGCGCCCGACGACAAGACCTTCGCCTATCTCAAGGGCCGCCCCTATGCGCCCAAGGGCGCGGAGTGGGACAAGGCCGTCGCCTGGTGGCGCAGCCTGGCGACCGATCCCGGCGCCACGTTCGACAAGTCGGTCCGCATCCGCGCGGAGGACATCCAGCCCACCGTCACCTGGGGCACCAGCCCCGAGGACGTCGTGCCGATCGGCGGCGTGGTGCCCGAGCCGGCGAGCTTCGCCGACCCGGCCAAGCAGCAGGCCGCCCAGGTCAGCCTCGACTACATGGGGCTGGAGCCGGGCACGAAGATGACCGACGTCGAGGTCCAGAACGTCTTCATCGGAAGCTGCACCAACAGCCGCATCGAGGACATCCGCGCCGCCGCCGAAGTGCTGCGCGGCCGCAAGAAGGCGGACAACGTCAAGTGGGCGATCGTCGTCCCCGGCTCGGGCCTGGTGAAGGCCCAGGCCGAGGCGGAGGGGCTCGACAAGGTCATCACCGCGGGGGGCCTCGAATGGCGCGGGCCAGGCTGCTCGGCCTGCCTCGCCATGAACCCCGACAAGGTCGACCAGCAACCGCAACTTTACCGGCCGCCAGGGTCCGGGCGCGCGGACCCACCTCGTCTCCCCGGCCATGGCCGCGGCGGCCGCAGTTACGGGCCGGCTGACCGACGTGCGGGAGCTGGTGGCGAGCTGAGGTGA
PROTEIN sequence
Length: 473
MSEKPRTLYEKIWDAHVVARQDDGTCLIYIDRHLVHEVTSPQAFEGLRAAGRKVRRPDLTLAVPDHNLPTTPRKDAAGNRIPIADAESANQLATLAKNAPAFGIRYISEVDPEQGIVHVVGPEQGFSVPGATIVCGDSHTSCHGGLGALAFGIGTTEVEHVLATQTLLLQPSKTFEVRVEGKLAPGVTPKDVVLHVIGVIGTAGGTGHVIEFCGNVFEEMSVEGRLTVCNMSIEGGARAGLVAPDDKTFAYLKGRPYAPKGAEWDKAVAWWRSLATDPGATFDKSVRIRAEDIQPTVTWGTSPEDVVPIGGVVPEPASFADPAKQQAAQVSLDYMGLEPGTKMTDVEVQNVFIGSCTNSRIEDIRAAAEVLRGRKKADNVKWAIVVPGSGLVKAQAEAEGLDKVITAGGLEWRGPGCSACLAMNPDKVDQQPQLYRPPGSGRADPPRLPGHGRGGRSYGPADRRAGAGGELR*