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SCNpilot_expt_1000_bf_scaffold_3288_5

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: comp(1842..2537)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Novosphingobium sp. AP12 RepID=J2GE33_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 217.0
  • Bit_score: 194
  • Evalue 1.10e-46
Transcriptional regulator {ECO:0000313|EMBL:EJL20698.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 217.0
  • Bit_score: 194
  • Evalue 1.50e-46
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 210.0
  • Bit_score: 161
  • Evalue 3.10e-37

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGCAGACCCGCAGCCCCACTCCCCTGTTCTCGGGCAAGGCGCAAAAGCCAGCGCGCCGCGACGGGCGCGGCCCCGGACGGCCGACGCGCGAGGTCATCGAGAAGCGCAACGCCGAGCTGCTCGACCGCGCGCTCGACCTGTTCCTCGACCACGGCTTCGACGCGACCACGATCGACGCGATCTGCGCCGACGTCGGCATGTCGCGGCGGACGATCTATACCCGCTACGGTGACAAGGAGACCCTGTTCCGCGCGGCGCTGCAACGGGCCATCGACCAGTGGATCGTACCCGTCGAGGAGCTGCGCGCCGAGGAATCCGACGACCTGGAGGCCACGCTGGTCGCGATCGCGCGGCGATGGGTCTCGAACATCCAGAAGCCGTCGGGGATGCGGCTGGTGCGGATCGCCAATACCGAGGTGTTCCGCGATCCCGATGTCGCGCAATACCTGTGGGAGCGGACCGCCCAGCCGACGATCGGCTACCTGACCGACCTGTTCCGCCGCCGGCTGCGGCCCGGCGAGCAGGCCATCGCCGATGCCGAGGACGCCGCGGCGGCCTACCTGATCCTGGTCGTCGAGGGATCGGTGCAGCTCGCGGTCTGGGGGCGGATGGCGCCCGGCGACTTCGCCCGCCAGATCATCTACCGGACGCGGCTGTTCCTGAACGGGGCGCGAGACCCCATCCCGCCCCGCTGA
PROTEIN sequence
Length: 232
MQTRSPTPLFSGKAQKPARRDGRGPGRPTREVIEKRNAELLDRALDLFLDHGFDATTIDAICADVGMSRRTIYTRYGDKETLFRAALQRAIDQWIVPVEELRAEESDDLEATLVAIARRWVSNIQKPSGMRLVRIANTEVFRDPDVAQYLWERTAQPTIGYLTDLFRRRLRPGEQAIADAEDAAAAYLILVVEGSVQLAVWGRMAPGDFARQIIYRTRLFLNGARDPIPPR*