ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3288_16

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: comp(15209..16171)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAC1_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 321.0
  • Bit_score: 321
  • Evalue 8.00e-85
Transcriptional regulator, LacI family {ECO:0000313|EMBL:KGB54495.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 321.0
  • Bit_score: 337
  • Evalue 1.50e-89
LacI family transcription regulator; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 321.0
  • Bit_score: 321
  • Evalue 2.50e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGACGGTTTCGCGGGCGATCAACGCCTCGTGCAGCATCCGTCCCGAAACGCAAGCTAAGGTCGAAGAGGCGGTTAGGGAATTGGGCTATGTCCCCAATCGCGCGGCGCGCAGCCTGGCCGGAGGGCGACAGAGCCGGATTGCGCTGGTCCACAGCAATCCGAGTGCCGGCTATCGCCGCGAGCTCCTAGTCGGCGCCGTGGCGCAGGCCAATGCCAGCAACGTCCAACTCAGCATCGAGCAGTGGGAAAAGGGCGACACAGTGGCCCAGTTCGTCGCCCGCCAAAAAGCGCACCAGATCGACGGGATCTTATTGCCCCCACCATTGTGCGAGGACGCGGCGCTAATCCACGCGCTGCATTCGGCGAGAATTAGGATCGTGCAGATTTCCCCCAGCCTGCCCAACCCCCTCGCCCATGCTTTAACGATTGAGGATATCAACGCGGCGCGCGCGATCACCGCTCACCTCGTCGAACTTGGCCATGTGCGCATCGGCTTCATCGAAGGCAGCGCGACCCAGTCGCAGAGTGCCTTGCGCCGCGCCGGTTACGAAACCGCACTGCGAGAGGCAGGGATCGCCTTGGAGCCTGACCTGATCGTGCCAGGCGACTTCTCCTATCGCTCGGGCTTGGTGGCGACCGAACGCCTTCTGGCTATCCCCCACCAACCGACAGCGATCTTCGCCAGTAACGACGAGATGGCCGCCGCGGCCGTGGCCATCGTCCATCGTCATCGCCTCGACGTGCCTACGGACATCTCGGTCTGCGGCTTCGACGACACTGCGATGGCAACCACGATTTGGCCCGAACTCACCACTATTCGTCAGCCGATCGCCAAAATGGCCAAGGCGGGCATCAAGCTGCTTTGCCGCAGCTCCGACGCGCAGGCGGATGAACCGCGATTATACTGTCTGCCAGTCGAGCTGATCGTTCGAGCCTCATCGGGACCGCCGTCCGCGGATTGA
PROTEIN sequence
Length: 321
MTVSRAINASCSIRPETQAKVEEAVRELGYVPNRAARSLAGGRQSRIALVHSNPSAGYRRELLVGAVAQANASNVQLSIEQWEKGDTVAQFVARQKAHQIDGILLPPPLCEDAALIHALHSARIRIVQISPSLPNPLAHALTIEDINAARAITAHLVELGHVRIGFIEGSATQSQSALRRAGYETALREAGIALEPDLIVPGDFSYRSGLVATERLLAIPHQPTAIFASNDEMAAAAVAIVHRHRLDVPTDISVCGFDDTAMATTIWPELTTIRQPIAKMAKAGIKLLCRSSDAQADEPRLYCLPVELIVRASSGPPSAD*