ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4420_29

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: 30107..30445

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 105.0
  • Bit_score: 178
  • Evalue 4.10e-42
DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 107.0
  • Bit_score: 173
  • Evalue 3.90e-41
DNA polymerase IV n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0JCV7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 106.0
  • Bit_score: 177
  • Evalue 6.60e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGGACTCGGGCGATGACGAGCAGGACGATGCCGCGCCCGGCCTGCGCAAGATCATCCACGTCGACATGGACGCCTTCTACGCCAGCGTCGAGCAGCGCGACGATCCGTCGCTGCGGGGCAAGCCGGTGGCGGTCGGCGGCTCGTCGGAGCGCGGGGTGGTCGCGGCGGCGAGCTACGAGGCGCGGCGGTTCGGGGTGCGCTCGGCCATGCCCTCGGTGCGGGCGGCGCGGCTCTGCCCGGGGCTGATCTTCCGCCGGGCGCGGTTCGACGTCTATCGCCAGGTCTCGCAGCAGATCCGCGCGATCTTCCTCGACTATACCCCCACGTCGAGCCGCTGA
PROTEIN sequence
Length: 113
MDSGDDEQDDAAPGLRKIIHVDMDAFYASVEQRDDPSLRGKPVAVGGSSERGVVAAASYEARRFGVRSAMPSVRAARLCPGLIFRRARFDVYRQVSQQIRAIFLDYTPTSSR*