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SCNpilot_expt_1000_bf_scaffold_5513_12

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: 6429..7139

Top 3 Functional Annotations

Value Algorithm Source
Flagellar L-ring protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EET8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 236.0
  • Bit_score: 401
  • Evalue 5.90e-109
  • rbh
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 236.0
  • Bit_score: 401
  • Evalue 8.20e-109
flgH; flagellar basal body L-ring protein; K02393 flagellar L-ring protein precursor FlgH similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 236.0
  • Bit_score: 350
  • Evalue 4.90e-94
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGAAAAAGACCGCCTTCGCACTCTCCGTCGCGCTGGCCTTGTCGGGCTGCTCCAACCAGGCGCTCAACGAGATCGGCAAAGCACCCGCGATGAGCCCGATCGGCAGCGGCCTGAACTACGCCGCGACCCCGCAGATGGCGGCCTATCCCAAGCAGCCGCGCACGGCGGTCTCCGGCTATTCCATCTGGAGCGACCAGCAATCGGCGCTCTTCAAGGATTCGCGCGCCTTCAAGGTGGGCGACATCCTGACGGTCAATATCCGCGTCAACGACAAGGCGAGCTTCGACAACAAGACCGACCGCTCGCGCAGCAACAAGAGCGGCATCAATTTCGGCCTCAGCGGCTCGACCGCCAGCAGCAGCGTCGACGCCAAGGGCGATCTTGGCTTCGGCTCGACCACCAGCACCAAGGGCGACGGCTCGACCGAGCGCTCGGAAAAGCTGAACCTGCTCGTCGCGGCCGTCGTCACCGGCGTCATCGAGAACGGCAACCTGCTGATCAGCGGCTCGCAGGAGGTGCGCGTCAACCATGAGCTGCGCATCCTCAACGTCGCCGGCATCGTGCGGCCGCAGGATGTCGATGCCAACAACATGATCGCCTACGAGCGCATCGCGGAAGCCCGCATCTCCTACGGCGGCCGCGGCCGCCTGACCGAAGTGCAGCAGCCGCCATGGGGCCAGCAGGCCGTCGATCTGCTCTCGCCGATCTGA
PROTEIN sequence
Length: 237
MKKTAFALSVALALSGCSNQALNEIGKAPAMSPIGSGLNYAATPQMAAYPKQPRTAVSGYSIWSDQQSALFKDSRAFKVGDILTVNIRVNDKASFDNKTDRSRSNKSGINFGLSGSTASSSVDAKGDLGFGSTTSTKGDGSTERSEKLNLLVAAVVTGVIENGNLLISGSQEVRVNHELRILNVAGIVRPQDVDANNMIAYERIAEARISYGGRGRLTEVQQPPWGQQAVDLLSPI*