ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6673_1

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: comp(48..677)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Ponticaulis koreensis RepID=UPI0003B6A0F1 similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 201.0
  • Bit_score: 171
  • Evalue 8.70e-40
GntR family transcriptional regulator {ECO:0000313|EMBL:KFK87356.1}; TaxID=1525753 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. JS01.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.5
  • Coverage: 220.0
  • Bit_score: 84
  • Evalue 1.50e-13
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 29.1
  • Coverage: 213.0
  • Bit_score: 81
  • Evalue 3.70e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces sp. JS01 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGCGCGTATCGATGTCGAGCAGATTGTTACCGCTGCCTGGAAGGTCGTCGACCGGGATGGAGTGGGGGCCTTCAAAATTCGCTCCGTGGCGGACGAACTCGGAATTTCGGCGATGGCGATCTACCACCATGTGCCTAACAAAGCAGCGCTTGCCGCCTTGATGGTCGAAGCCGCCAGTAACGAGCGCCCCCTTTCATCACCTACTGGAGAATGGAAGGAGGATCTCTGGCTGCAAGCGCAGTGGCTTCGCGATATGCGCCAAGCACACCCGGCAATGGGGGCGATCCACCGCGAATATCGAACCTGGAGTCCAGCTCTTTTGCGGACGACCGAACGATGGGTCAATTTGTGGCAACAAAGCGATCTGCCGTTCGAGCGTGCCTTGATAGCGGCCCGCGCCAGTAGTCAGGCAATCGTTGGAATGGTGGACGAGGAGGCTGCTTATGAAGCAGAGCCGCCTCCCGGCGAAAACCTTCTCACCTGGATGCCTTCGGTCAGAACCATGTTCGAAAAAGATCACTGCCGGACCAGTCTCTTCGAACTTACCGTGCGATCGATAATCGATGGTCTGTACGCCCGTCTGTTGGACGATAACGCTGATCTCGGCCGCTTGCTGCAGCACAGATAG
PROTEIN sequence
Length: 210
MARIDVEQIVTAAWKVVDRDGVGAFKIRSVADELGISAMAIYHHVPNKAALAALMVEAASNERPLSSPTGEWKEDLWLQAQWLRDMRQAHPAMGAIHREYRTWSPALLRTTERWVNLWQQSDLPFERALIAARASSQAIVGMVDEEAAYEAEPPPGENLLTWMPSVRTMFEKDHCRTSLFELTVRSIIDGLYARLLDDNADLGRLLQHR*