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AMDSBA5_16

Alias: AMDSBA5_C15

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA5_16_1
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

411..1007
-----------------
DNA (597bp)
protein (199aa)
hypothetical protein
Conserved domain protein n=3 Tax=root RepID=B7J8K3_ACIF2 (db=UNIREF evalue=7.6e-13 bit_score=79.7 identity=29.8 coverage=93.96984924623115)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=1 to=197 evalue=9.9e-30)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=8 to=196 evalue=1.6e-12)
AMDSBA5_16_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1114..2469)
-----------------
DNA (1356bp)
protein (452aa)
O-antigen polymerase
O-antigen polymerase
O-antigen polymerase n=2 Tax=Sulfobacillus acidophilus RepID=G8TSI3_9FIRM (db=UNIREF evalue=2.6e-109 bit_score=401.4 identity=49.7 coverage=92.92035398230088)
transmembrane_regions (db=TMHMM db_id=tmhmm from=415 to=437)
AMDSBA5_16_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2961..3875)
-----------------
DNA (915bp)
protein (305aa)
RpiR family transcriptional regulator
Putative transcriptional regulator (RpiR family) n=1 Tax=Listeria ivanovii subsp. ivanovii PAM 55 RepID=G2ZAD9_LISIP (db=UNIREF evalue=2.3e-29 bit_score=135.2 identity=33.3 coverage=90.81967213114754)
no description (db=Gene3D db_id=G3DSA:3.40.50.10490 from=88 to=293 evalue=1.1e-34)
SIS domain (db=superfamily db_id=SSF53697 from=95 to=285 evalue=1.8e-33)
AMDSBA5_16_4
unknown

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3935..4072
-----------------
DNA (138bp)
protein (46aa)
3935..4072 + ( gc_cont=0.290)
AMDSBA5_16_5
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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4111..5916
-----------------
DNA (1806bp)
protein (602aa)
family 5 extracellular solute-binding protein
family 5 extracellular solute-binding protein
ABC-type dipeptide transport system periplasmic component-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2ARA8_STRRD (db=UNIREF evalue=2.6e-133 bit_score=481.5 identity=40.9 coverage=99.66777408637874)
AMDSBA5_16_6
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5999..6988
-----------------
DNA (990bp)
protein (330aa)
peptide ABC transporter permease
Cellobiose ABC transporter permease protein n=1 Tax=Sulfolobus tokodaii str. 7 RepID=Q96XI0_SULTO (db=UNIREF evalue=6.4e-57 bit_score=226.9 identity=35.3 coverage=99.0909090909091)
transmembrane_regions (db=TMHMM db_id=tmhmm from=301 to=323)
transmembrane_regions (db=TMHMM db_id=tmhmm from=251 to=273)
AMDSBA5_16_7
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6995..7909
-----------------
DNA (915bp)
protein (305aa)
ABC transporter permease
ABC transporter permease
ABC transporter, permease n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2ARA6_STRRD (db=UNIREF evalue=6.2e-99 bit_score=366.3 identity=61.3 coverage=92.78688524590164)
AMDSBA5_16_8
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7914..8918
-----------------
DNA (1005bp)
protein (335aa)
ABC transporter ATP-binding protein
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=5 Tax=Streptomyces RepID=B5GHK4_9ACTO (db=UNIREF evalue=4.2e-56 bit_score=224.2 identity=39.3 coverage=95.82089552238806)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=15 to=333 evalue=5.6e-108)
seg (db=Seg db_id=seg from=72 to=86)
AMDSBA5_16_9
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8911..9918
-----------------
DNA (1008bp)
protein (336aa)
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide transporter domain family protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R3K8_9RHOB (db=UNIREF evalue=1.5e-53 bit_score=215.7 identity=34.6 coverage=94.94047619047619)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=325 evalue=9.2e-101)
seg (db=Seg db_id=seg from=185 to=201)
AMDSBA5_16_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9960..11063
-----------------
DNA (1104bp)
protein (368aa)
beta-lactamase
Beta-lactamase n=1 Tax=Aspergillus clavatus NRRL 1 RepID=A1CAU7_ASPCL (db=UNIREF evalue=8.5e-10 bit_score=70.5 identity=27.2 coverage=58.96739130434783)
seg (db=Seg db_id=seg from=78 to=92)
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=17 to=366 evalue=4.0e-76 interpro_id=IPR012338 interpro_description=Beta-lactamase/transpeptidase-like)
AMDSBA5_16_11
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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11160..12221
-----------------
DNA (1062bp)
protein (354aa)
GCN5-related N-acetyltransferase
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=137 evalue=1.7e-11 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
GNAT (db=ProfileScan db_id=PS51186 from=5 to=149 evalue=11.675 interpro_id=IPR000182 interpro_description=GCN5-related N-acetyltransferase (GNAT) domain GO=Molecular Function: N-acetyltransferase activity (GO:0008080))
GCN5-related N-acetyltransferase n=1 Tax=Ornithinibacillus scapharcae TW25 RepID=UPI000225BB5B
AMDSBA5_16_12
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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12291..13247
-----------------
DNA (957bp)
protein (319aa)
GCN5-like N-acetyltransferase
Acetyltransferase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZ99_9BACL (db=UNIREF evalue=1.7e-70 bit_score=271.9 identity=43.5 coverage=96.86520376175548)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=147 evalue=9.8e-21 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=175 to=312 evalue=3.5e-17 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
AMDSBA5_16_13
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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13313..14014
-----------------
DNA (702bp)
protein (234aa)
LmbE family protein
Bacillithiol biosynthesis deacetylase BshB1 n=1 Tax=Ornithobacterium rhinotracheale DSM 15997 RepID=I3ZX58_9FLAO (db=UNIREF evalue=3.0e-08 bit_score=64.7 identity=30.2 coverage=67.09401709401709)
LmbE-like (db=superfamily db_id=SSF102588 from=1 to=226 evalue=1.2e-36 interpro_id=IPR024078 interpro_description=Putative deacetylase LmbE-like domain)
(db=HMMPfam db_id=PF02585 from=4 to=125 evalue=4.7e-20 interpro_id=IPR003737 interpro_description=N-acetylglucosaminyl phosphatidylinositol deacetylase)
AMDSBA5_16_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14045..15217
-----------------
DNA (1173bp)
protein (391aa)
hypothetical protein
YbbC n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVI2_9EURY (db=UNIREF evalue=2.1e-67 bit_score=261.9 identity=39.9 coverage=90.28132992327366)
seg (db=Seg db_id=seg from=97 to=110)
coiled-coil (db=Coil db_id=coil from=363 to=384 evalue=NA)
AMDSBA5_16_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15245..16846
-----------------
DNA (1602bp)
protein (534aa)
nagZ; glycoside hydrolase family protein
Beta-hexosaminidase n=1 Tax=Bordetella avium 197N RepID=NAGZ_BORA1 (db=UNIREF evalue=4.7e-33 bit_score=148.3 identity=33.4 coverage=51.87265917602997)
seg (db=Seg db_id=seg from=127 to=141)
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=9 to=332 evalue=5.1e-98 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, superfamily)
AMDSBA5_16_16
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16869..17639
-----------------
DNA (771bp)
protein (257aa)
nagB; glucosamine-6-phosphate isomerase (EC:3.5.99.6)
6-phosphogluconolactonase/glucosamine-6-phosphate isomerase/deaminase n=1 Tax=Synechococcus sp. CB0101 RepID=UPI00020019AE (db=UNIREF evalue=2.2e-33 bit_score=148.3 identity=39.8 coverage=82.10116731517509)
seg (db=Seg db_id=seg from=241 to=252)
GLC_GALNAC_ISOMERASE (db=PatternScan db_id=PS01161 from=117 to=135 evalue=0.0 interpro_id=IPR018321 interpro_description=Glucosamine-6-phosphate isomerase, conserved site GO=Molecular Function: glucosamine-6-phosphate deaminase activity (GO:0004342), Biological Process: N-acetylglucosamine metabolic process (GO:0006044))
AMDSBA5_16_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17956..18345
-----------------
DNA (390bp)
protein (130aa)
histidine triad (HIT) protein
Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7TAR3_NEMVE (db=UNIREF evalue=5.3e-23 bit_score=112.8 identity=52.0 coverage=74.61538461538461)
(db=HMMPfam db_id=PF01230 from=11 to=99 evalue=1.4e-19 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
HISTIDINE TRIAD (HIT) PROTEIN (db=HMMPanther db_id=PTHR23089 from=18 to=98 evalue=4.9e-15 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
AMDSBA5_16_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18342..19298
-----------------
DNA (957bp)
protein (319aa)
2-nitropropane dioxygenase (EC:1.13.12.16)
2-nitropropane dioxygenase, NPD n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN88_9FIRM (db=UNIREF evalue=6.0e-60 bit_score=236.9 identity=42.3 coverage=92.16300940438872)
Inosine monophosphate dehydrogenase (IMPDH) (db=superfamily db_id=SSF51412 from=2 to=309 evalue=1.1e-57)
seg (db=Seg db_id=seg from=173 to=191)
AMDSBA5_16_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19509..21404)
-----------------
DNA (1896bp)
protein (632aa)
glycoside hydrolase family protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TU54_9FIRM (db=UNIREF evalue=9.2e-12 bit_score=77.8 identity=27.0 coverage=32.436708860759495)
seg (db=Seg db_id=seg from=392 to=409)
seg (db=Seg db_id=seg from=487 to=501)
AMDSBA5_16_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21818..22417
-----------------
DNA (600bp)
protein (200aa)
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z4L1_9BACT (db=UNIREF evalue=5.8e-29 bit_score=133.3 identity=38.1 coverage=89.5)
GUANYLATE_KINASE_1 (db=PatternScan db_id=PS00856 from=37 to=54 evalue=0.0 interpro_id=IPR020590 interpro_description=Guanylate kinase, conserved site)
guanyl_kin: guanylate kinase (db=HMMTigr db_id=TIGR03263 from=3 to=177 evalue=5.7e-53 interpro_id=IPR017665 interpro_description=Guanylate kinase, sub-group GO=Molecular Function: guanylate kinase activity (GO:0004385), Biological Process: purine nucleotide metabolic process (GO:0006163))
AMDSBA5_16_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22418..23488
-----------------
DNA (1071bp)
protein (357aa)
group 1 glycosyl transferase
group 1 glycosyl transferase
Glycosyl transferase group 1 n=2 Tax=Sulfobacillus acidophilus RepID=G8TSF9_9FIRM (db=UNIREF evalue=1.8e-97 bit_score=361.7 identity=53.0 coverage=95.7983193277311)
AMDSBA5_16_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23503..23769
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TSF8_9FIRM (db=UNIREF evalue=5.8e-21 bit_score=105.5 identity=61.4 coverage=92.13483146067416)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I211_SULAT
AMDSBA5_16_23
Bacillus sp. JF8, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23766..24251)
-----------------
DNA (486bp)
protein (162aa)
mocB; hydroxylase small component
FMN reductase (NADH) RutF n=1 Tax=Acinetobacter sp. ADP1 RepID=RUTF_ACIAD (db=UNIREF evalue=1.9e-09 bit_score=68.2 identity=25.5 coverage=93.82716049382715)
FMN-binding split barrel (db=superfamily db_id=SSF50475 from=1 to=157 evalue=5.3e-43 interpro_id=IPR009002 interpro_description=FMN-binding split barrel-related)
no description (db=HMMSmart db_id=SM00903 from=10 to=155 evalue=3.7e-42 interpro_id=IPR002563 interpro_description=Flavin reductase-like, FMN-binding GO=Molecular Function: FMN binding (GO:0010181), Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: flavin reductase activity (GO:0042602), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA5_16_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24351..25535
-----------------
DNA (1185bp)
protein (395aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=2 Tax=Rhodospirillum rubrum RepID=G2TB66_RHORU (db=UNIREF evalue=7.1e-55 bit_score=220.3 identity=38.3 coverage=91.64556962025317)
seg (db=Seg db_id=seg from=95 to=111)
THIOLASE_2 (db=PatternScan db_id=PS00737 from=343 to=359 evalue=0.0 interpro_id=IPR020613 interpro_description=Thiolase, conserved site GO=Biological Process: metabolic process (GO:0008152), Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747))
AMDSBA5_16_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25520..26560
-----------------
DNA (1041bp)
protein (347aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=29)
seg (db=Seg db_id=seg from=225 to=236)
Rhodanese/Cell cycle control phosphatase (db=superfamily db_id=SSF52821 from=233 to=328 evalue=1.8e-20 interpro_id=IPR001763 interpro_description=Rhodanese-like)
Rhodanese/Cell cycle control phosphatase (db=superfamily db_id=SSF52821 from=62 to=172 evalue=2.7e-17 interpro_id=IPR001763 interpro_description=Rhodanese-like)
AMDSBA5_16_26
unknown

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comp(26571..27611)
-----------------
DNA (1041bp)
protein (347aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=104 to=125)
Kelch motif (db=superfamily db_id=SSF117281 from=81 to=339 evalue=1.9e-17)
no description (db=Gene3D db_id=G3DSA:2.120.10.80 from=156 to=338 evalue=8.1e-08 interpro_id=IPR015915 interpro_description=Kelch-type beta propeller GO=Molecular Function: protein binding (GO:0005515))
AMDSBA5_16_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27608..29341)
-----------------
DNA (1734bp)
protein (578aa)
seg (db=Seg db_id=seg from=6 to=14)
seg (db=Seg db_id=seg from=240 to=250)
seg (db=Seg db_id=seg from=487 to=494)
hypothetical protein
AMDSBA5_16_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29338..31056)
-----------------
DNA (1719bp)
protein (573aa)
type III restriction protein res subunit
type III restriction protein res subunit
Putative helicase n=1 Tax=uncultured archaeon RepID=D1JFG1_9ARCH (db=UNIREF evalue=7.7e-175 bit_score=619.4 identity=56.2 coverage=94.9389179755672)
AMDSBA5_16_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31172..31669
-----------------
DNA (498bp)
protein (166aa)
hypothetical protein
Similarity to hypothetical protein YKL069w -Saccharomyces cerevisiae n=2 Tax=Aspergillus niger CBS 513.88 RepID=A2QH00_ASPNC (db=UNIREF evalue=3.0e-23 bit_score=114.0 identity=39.3 coverage=83.73493975903614)
no description (db=Gene3D db_id=G3DSA:3.30.450.40 from=1 to=162 evalue=5.2e-48)
GAF DOMAIN-CONTAINING PROTEIN, INVOLVED IN SIGNAL TRANSDUCTION (db=HMMPanther db_id=PTHR21021:SF15 from=21 to=155 evalue=6.5e-45)
AMDSBA5_16_30
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(31674..32132)
-----------------
DNA (459bp)
protein (153aa)
Haloacid dehalogenase domain protein hydrolase type 3 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLA6_9CHLR (db=UNIREF evalue=3.5e-26 bit_score=123.6 identity=45.7 coverage=96.73202614379085)
soluble P-type ATPase
HAD-like (db=superfamily db_id=SSF56784 from=14 to=142 evalue=1.5e-13 interpro_id=IPR023214 interpro_description=HAD-like domain)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=12 to=112 evalue=3.4e-06 interpro_id=IPR023214 interpro_description=HAD-like domain)
Displaying items 1-30 of 72 in total

View Taxonomy