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AMDSBA5_100

Alias: AMDSBA5_C99

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA5_100_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..305
-----------------
DNA (303bp)
protein (101aa)
exodeoxyribonuclease VII large subunit
seg (db=Seg db_id=seg from=41 to=52)
Exodeoxyribonuclease VII, large subunit n=1 Tax=Sulfobacillus acidophilus (strain TPY) RepID=F8I9E3_SULAT
AMDSBA5_100_2
unknown

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302..481
-----------------
DNA (180bp)
protein (60aa)
(db=HMMPfam db_id=PF02609 from=3 to=48 evalue=8.8e-11 interpro_id=IPR003761 interpro_description=Exonuclease VII, small subunit GO=Biological Process: DNA catabolic process (GO:0006308), Molecular Function: exodeoxyribonuclease VII activity (GO:0008855), Cellular Component: exodeoxyribonuclease VII complex (GO:0009318))
XseB-like (db=superfamily db_id=SSF116842 from=1 to=49 evalue=5.9e-07)
Q75TG6_BACST_Q75TG6; (db=BlastProDom db_id=PD028235 from=1 to=37 evalue=0.0009 interpro_id=IPR003761 interpro_description=Exonuclease VII, small subunit GO=Biological Process: DNA catabolic process (GO:0006308), Molecular Function: exodeoxyribonuclease VII activity (GO:0008855), Cellular Component: exodeoxyribonuclease VII complex (GO:0009318))
AMDSBA5_100_3
unknown

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557..889
-----------------
DNA (333bp)
protein (111aa)
seg (db=Seg db_id=seg from=7 to=20)
AMDSBA5_100_4
unknown

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1036..1305
-----------------
DNA (270bp)
protein (90aa)
1036..1305 + ( gc_cont=0.648)
AMDSBA5_100_5
unknown

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comp(1290..1610)
-----------------
DNA (321bp)
protein (107aa)
seg (db=Seg db_id=seg from=2 to=12)
AMDSBA5_100_6
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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1826..2188
-----------------
DNA (363bp)
protein (121aa)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=2 to=79 evalue=3.2e-15 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=8 to=74 evalue=1.9e-13 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00530 from=11 to=66 evalue=1.4e-12 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
(db=HMMPfam db_id=PF01381 from=12 to=66 evalue=8.7e-11 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
AMDSBA5_100_7
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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2191..2937
-----------------
DNA (747bp)
protein (249aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Thermoanaerobacter RepID=D3T529_THEIA (db=UNIREF evalue=2.5e-37 bit_score=161.4 identity=38.7 coverage=87.95180722891565)
(db=HMMPfam db_id=PF06114 from=48 to=161 evalue=1.1e-11 interpro_id=IPR010359 interpro_description=Protein of unknown function DUF955)
Uncharacterized protein n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4QBM3_CALH1
AMDSBA5_100_8
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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2912..3493
-----------------
DNA (582bp)
protein (194aa)
seg (db=Seg db_id=seg from=51 to=62)
hypothetical protein
Displaying 8 items

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