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AMDSBA5_102

Alias: AMDSBA5_C101

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA5_102_1
unknown

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comp(95..235)
-----------------
DNA (141bp)
protein (47aa)
95..235 - ( gc_cont=0.518)
AMDSBA5_102_2
unknown

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comp(232..753)
-----------------
DNA (522bp)
protein (174aa)
seg (db=Seg db_id=seg from=63 to=78)
AMDSBA5_102_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2055..2528
-----------------
DNA (474bp)
protein (158aa)
no description (db=HMMSmart db_id=SM00530 from=5 to=60 evalue=2.7e-19 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=1 to=63 evalue=2.9e-19 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=66 evalue=4.7e-19 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
(db=HMMPfam db_id=PF01381 from=6 to=60 evalue=6.7e-17 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
AMDSBA5_102_4
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(3200..3682)
-----------------
DNA (483bp)
protein (161aa)
seg (db=Seg db_id=seg from=110 to=130)
seg (db=Seg db_id=seg from=140 to=152)
DEAD/DEAH box helicase
DEAD-like helicase n=2 Tax=Thermoanaerobacterium RepID=I3WBQ1_THESW
Displaying 4 items

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