| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| RNA polymerase factor sigma-70 (EC:2.7.7.6) | similarity |
KEGG
DB: KEGG |
42.4 | 191.0 | 153 | 5.40e-35 | tap:GZ22_17710 |
| RNA polymerase sigma-H factor n=3 Tax=Bacillus megaterium RepID=G2RL08_BACME (db=UNIREF evalue=3.9e-31 bit_score=140.6 identity=39.8 coverage=89.2018779342723) | similarity |
UNIREF
DB: UNIREF |
39.8 | 89.2 | 140 | 3.90e-31 | tap:GZ22_17710 |
| coiled-coil (db=Coil db_id=coil from=191 to=212 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | tap:GZ22_17710 |
| HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=177 to=204 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | tap:GZ22_17710 |
| RNA polymerase sigma-H factor (db=HMMPIR db_id=PIRSF002939 from=6 to=212 evalue=3.0e-56 interpro_id=IPR016371 interpro_description=RNA polymerase sigma-H factor GO=Molecular Function: DNA binding (GO:0003677), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 3.00e-56 | tap:GZ22_17710 |
| sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=31 to=209 evalue=2.2e-28 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 | iprscan |
interpro
DB: HMMTigr |
null | null | null | 2.20e-28 | tap:GZ22_17710 |
| Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=17 to=106 evalue=4.9e-17 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fact | iprscan |
interpro
DB: superfamily |
null | null | null | 4.90e-17 | tap:GZ22_17710 |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=120 to=211 evalue=5.8e-13 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
null | null | null | 5.80e-13 | tap:GZ22_17710 |
| (db=HMMPfam db_id=PF04542 from=36 to=105 evalue=2.8e-12 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.80e-12 | tap:GZ22_17710 |
| (db=HMMPfam db_id=PF08281 from=154 to=205 evalue=1.9e-09 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.90e-09 | tap:GZ22_17710 |
| no description (db=Gene3D db_id=G3DSA:1.10.601.10 from=35 to=105 evalue=1.4e-06) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.40e-06 | tap:GZ22_17710 |
| RNA polymerase factor sigma-70 {ECO:0000313|EMBL:AIF68286.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AIF68286.1};; TaxID=586416 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Terribacillus.;" |
UNIPROT
DB: UniProtKB |
42.4 | 191.0 | 153 | 2.70e-34 | A0A075LQ80_9BACI | |
| Transcriptional regulator, LuxR family n=1 Tax=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) RepID=C4KZR3_EXISA | similarity |
UNIREF
DB: UNIREF90 |
38.6 | null | 151 | 2.30e-34 | tap:GZ22_17710 |