ggKbase home page
Advanced Search
Search Help

AMDSBA5_14_10 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
uvrB; excinuclease ABC subunit B rbh KEGG
DB: KEGG 		79.8 673.0 1076 0.0 say:TPY_0846
uvrB; excinuclease ABC subunit B similarity KEGG
DB: KEGG 		79.8 673.0 1076 0.0 say:TPY_0846
UvrABC system protein B n=4 Tax=Acinetobacter RepID=UVRB_ACIAD (db=UNIREF evalue=4.3e-217 bit_score=760.0 identity=57.8 coverage=97.0193740685544) similarity UNIREF
DB: UNIREF 		57.8 97.02 760 4.30e-217 say:TPY_0846
seg (db=Seg db_id=seg from=265 to=281) iprscan interpro
DB: Seg 		null null null null say:TPY_0846
coiled-coil (db=Coil db_id=coil from=263 to=291 evalue=NA) iprscan interpro
DB: Coil 		null null null null say:TPY_0846
coiled-coil (db=Coil db_id=coil from=616 to=637 evalue=NA) iprscan interpro
DB: Coil 		null null null null say:TPY_0846
rbh rbh UNIREF
DB: UNIREF 		null null null null say:TPY_0846
uvrb: excinuclease ABC subunit B (db=HMMTigr db_id=TIGR00631 from=3 to=653 evalue=0.0 interpro_id=IPR004807 interpro_description=UvrABC system, B subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281), Biological Process: nucleotide-excision repair (GO:0006289), Molecular Function: excinuclease ABC activity (GO:0009381), Biological Process: SOS response (GO:0009432)) iprscan interpro
DB: HMMTigr 		null null null 0.0 say:TPY_0846
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=413 evalue=3.5e-142) iprscan interpro
DB: superfamily 		null null null 3.50e-142 say:TPY_0846
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=4 to=234 evalue=7.5e-76) iprscan interpro
DB: Gene3D 		null null null 7.50e-76 say:TPY_0846
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=410 to=577 evalue=3.7e-56) iprscan interpro
DB: Gene3D 		null null null 3.70e-56 say:TPY_0846
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=30 to=587 evalue=2.0e-38) iprscan interpro
DB: superfamily 		null null null 2.00e-38 say:TPY_0846
no description (db=HMMSmart db_id=SM00487 from=8 to=424 evalue=2.7e-25 interpro_id=IPR014001 interpro_description=DEAD-like helicase) iprscan interpro
DB: HMMSmart 		null null null 2.70e-25 say:TPY_0846
(db=HMMPfam db_id=PF12344 from=550 to=593 evalue=1.1e-23 interpro_id=IPR024759 interpro_description=UvrB, YAD/RRR-motif-containing domain) iprscan interpro
DB: HMMPfam 		null null null 1.10e-23 say:TPY_0846
no description (db=HMMSmart db_id=SM00490 from=458 to=544 evalue=1.1e-19 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: HMMSmart 		null null null 1.10e-19 say:TPY_0846
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=286 to=409 evalue=1.5e-16) iprscan interpro
DB: Gene3D 		null null null 1.50e-16 say:TPY_0846
(db=HMMPfam db_id=PF00271 from=463 to=542 evalue=1.9e-15 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: HMMPfam 		null null null 1.90e-15 say:TPY_0846
(db=HMMPfam db_id=PF04851 from=13 to=83 evalue=1.1e-10 interpro_id=IPR006935 interpro_description=Helicase/UvrB domain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP binding (GO:0005524), Molecular Function: hydrolase activity (GO:0016787)) iprscan interpro
DB: HMMPfam 		null null null 1.10e-10 say:TPY_0846
C-terminal UvrC-binding domain of UvrB (db=superfamily db_id=SSF46600 from=605 to=654 evalue=3.5e-08 interpro_id=IPR009055 interpro_description=UvrB, C-terminal UvrC-binding GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: superfamily 		null null null 3.50e-08 say:TPY_0846
(db=HMMPfam db_id=PF02151 from=622 to=655 evalue=5.9e-07 interpro_id=IPR001943 interpro_description=UvrB/UvrC protein GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: HMMPfam 		null null null 5.90e-07 say:TPY_0846
DEAD BOX ATP-DEPENDENT RNA HELICASE (db=HMMPanther db_id=PTHR10967 from=431 to=670 evalue=6.4e-07) iprscan interpro
DB: HMMPanther 		null null null 6.40e-07 say:TPY_0846
no description (db=Gene3D db_id=G3DSA:4.10.860.10 from=598 to=660 evalue=0.00015) iprscan interpro
DB: Gene3D 		null null null 1.50e-04 say:TPY_0846
UVR (db=ProfileScan db_id=PS50151 from=620 to=655 evalue=11.884 interpro_id=IPR001943 interpro_description=UvrB/UvrC protein GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: ProfileScan 		null null null 1.19e+01 say:TPY_0846
HELICASE_ATP_BIND_1 (db=ProfileScan db_id=PS51192 from=25 to=159 evalue=16.407 interpro_id=IPR014001 interpro_description=DEAD-like helicase) iprscan interpro
DB: ProfileScan 		null null null 1.64e+01 say:TPY_0846
HELICASE_CTER (db=ProfileScan db_id=PS51194 from=429 to=595 evalue=22.37 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: ProfileScan 		null null null 2.24e+01 say:TPY_0846
UvrB (db=HAMAP db_id=MF_00204 from=2 to=655 evalue=43.887 interpro_id=IPR004807 interpro_description=UvrABC system, B subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281), Biological Process: nucleotide-excision repair (GO:0006289), Molecular Function: excinuclease ABC activity (GO:0009381), Biological Process: SOS response (GO:0009432)) iprscan interpro
DB: HAMAP 		null null null 4.39e+01 say:TPY_0846
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0 UNIPROT
DB: UniProtKB 		80.4 664.0 1076 0.0 G8TYJ7_SULAD