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AMDSBA5_14

Alias: AMDSBA5_C13

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Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_14_1
Bacillus manliponensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..673)
DNA (672bp) protein (224aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=2 to=219 evalue=1.2e-33)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=2 to=219 evalue=2.3e-29)
PROLINE IMINOPEPTIDASE (db=HMMPanther db_id=PTHR10992:SF12 from=1 to=220 evalue=1.2e-24 interpro_id=IPR005944 interpro_description=Peptidase S33, proline iminopeptidase 1 GO=Molecular Function: aminopeptidase activity (GO:0004177), Cellular Component: cytoplasm (GO:0005737))
AMDSBA5_14_2
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(673..897)
DNA (225bp) protein (75aa)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=2 to=55 evalue=3.8e-08)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=5 to=55 evalue=0.00047)
pip; proline iminopeptidase
Uncharacterized protein {ECO:0000313|EMBL:EEL45847.1}; TaxID=526985 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus Rock3-42
AMDSBA5_14_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1092..1976)
DNA (885bp) protein (295aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2 Tax=Thermaerobacter RepID=E4M124_9FIRM (db=UNIREF evalue=3.0e-106 bit_score=390.6 identity=66.2 coverage=98.98305084745763)
seg (db=Seg db_id=seg from=133 to=144)
AMDSBA5_14_4
unknown

Not on your lists

comp(2030..2725)
DNA (696bp) protein (232aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=112 to=134)
transmembrane_regions (db=TMHMM db_id=tmhmm from=149 to=171)
transmembrane_regions (db=TMHMM db_id=tmhmm from=178 to=200)
transmembrane_regions (db=TMHMM db_id=tmhmm from=205 to=224)
AMDSBA5_14_5
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2728..3243)
DNA (516bp) protein (172aa)
redoxin domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
seg (db=Seg db_id=seg from=7 to=22)
THIOREDOXIN_1 (db=PatternScan db_id=PS00194 from=63 to=81 evalue=0.0 interpro_id=IPR017937 interpro_description=Thioredoxin, conserved site GO=Biological Process: cell redox homeostasis (GO:0045454))
AMDSBA5_14_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3255..3956)
DNA (702bp) protein (234aa)
cytochrome c biogenesis protein transmembrane region rbh
Cytochrome c-type biogenesis protein CcdA n=9 Tax=Bacillus RepID=CCDA_BACSU (db=UNIREF evalue=1.2e-30 bit_score=139.0 identity=34.7 coverage=92.73504273504274)
transmembrane_regions (db=TMHMM db_id=tmhmm from=208 to=225)
transmembrane_regions (db=TMHMM db_id=tmhmm from=166 to=188)
AMDSBA5_14_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4068..4754
DNA (687bp) protein (229aa)
cell division ATP-binding protein FtsE (EC:3.6.3.28)
cell division ATP-binding protein FtsE (EC:3.6.3.28)
Putative ABC transporter ATP-binding protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRP6_9SPHN (db=UNIREF evalue=3.7e-19 bit_score=100.9 identity=28.5 coverage=93.44978165938865)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=223 evalue=1.3e-113)
AMDSBA5_14_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4744..5631
DNA (888bp) protein (296aa)
hypothetical protein
hypothetical protein
Cell division ABC transporter, permease protein FtsX n=2 Tax=Sulfobacillus acidophilus RepID=F8I9W2_SULAT (db=UNIREF evalue=4.5e-102 bit_score=376.7 identity=63.1 coverage=99.32432432432432)
transmembrane_regions (db=TMHMM db_id=tmhmm from=272 to=289)
AMDSBA5_14_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5683..6873
DNA (1191bp) protein (397aa)
prc; carboxyl-terminal protease
Putative uncharacterized protein n=1 Tax=Prevotella oulorum F0390 RepID=G1WCR7_9BACT (db=UNIREF evalue=6.3e-43 bit_score=180.6 identity=34.1 coverage=80.60453400503779)
seg (db=Seg db_id=seg from=226 to=240)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA5_14_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6895..8907
DNA (2013bp) protein (671aa)
uvrB; excinuclease ABC subunit B
uvrB; excinuclease ABC subunit B
UvrABC system protein B n=4 Tax=Acinetobacter RepID=UVRB_ACIAD (db=UNIREF evalue=4.3e-217 bit_score=760.0 identity=57.8 coverage=97.0193740685544)
seg (db=Seg db_id=seg from=265 to=281)
AMDSBA5_14_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8900..11737
DNA (2838bp) protein (946aa)
excinuclease ABC subunit A
excinuclease ABC subunit A
Excinuclease ABC subunit A n=2 Tax=Archaea RepID=I3RKD4_9ARCH (db=UNIREF evalue=0.0 bit_score=1058.5 identity=56.6 coverage=99.04862579281183)
seg (db=Seg db_id=seg from=899 to=912)
AMDSBA5_14_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11768..13681
DNA (1914bp) protein (638aa)
excinuclease ABC subunit C
excinuclease ABC subunit C
UvrABC system protein C (Fragment) n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MH99_9BACT (db=UNIREF evalue=2.2e-13 bit_score=83.2 identity=39.0 coverage=15.360501567398119)
seg (db=Seg db_id=seg from=229 to=241)
AMDSBA5_14_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13733..14074
DNA (342bp) protein (114aa)
membrane protein
Putative uncharacterized protein n=1 Tax=Fischerella sp. JSC-11 RepID=G6FXD3_9CYAN (db=UNIREF evalue=2.0e-10 bit_score=70.9 identity=33.0 coverage=92.10526315789474)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=46)
transmembrane_regions (db=TMHMM db_id=tmhmm from=3 to=25)
AMDSBA5_14_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14053..14901
DNA (849bp) protein (283aa)
Cof-like hydrolase n=2 Tax=Sulfobacillus acidophilus RepID=G8TYJ3_9FIRM (db=UNIREF evalue=1.5e-75 bit_score=288.5 identity=53.0 coverage=98.23321554770318)
cof family hydrolase
COF_2 (db=PatternScan db_id=PS01229 from=220 to=242 evalue=0.0 interpro_id=IPR000150 interpro_description=Cof protein GO=Biological Process: metabolic process (GO:0008152), Molecular Function: hydrolase activity (GO:0016787))
HAD-like (db=superfamily db_id=SSF56784 from=6 to=271 evalue=5.1e-59 interpro_id=IPR023214 interpro_description=HAD-like domain)
AMDSBA5_14_15
unknown

Not on your lists

comp(14863..15108)
DNA (246bp) protein (82aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
seg (db=Seg db_id=seg from=47 to=58)
AMDSBA5_14_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15256..16125
DNA (870bp) protein (290aa)
hypothetical protein
UPF0042 nucleotide-binding protein jk1004 n=2 Tax=Corynebacterium jeikeium RepID=Y1004_CORJK (db=UNIREF evalue=1.6e-51 bit_score=208.8 identity=39.4 coverage=96.20689655172414)
coiled-coil (db=Coil db_id=coil from=110 to=131 evalue=NA)
Predicted P-loop kinase, YhbJ type (db=HMMPIR db_id=PIRSF005052 from=1 to=289 evalue=4.7e-133 interpro_id=IPR005337 interpro_description=ATPase, P-loop-containing GO=Molecular Function: ATP binding (GO:0005524))
AMDSBA5_14_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16127..17461
DNA (1335bp) protein (445aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus DSM 785 RepID=A9B6F9_HERA2 (db=UNIREF evalue=7.7e-90 bit_score=336.7 identity=45.0 coverage=92.58426966292134)
seg (db=Seg db_id=seg from=52 to=68)
AMDSBA5_14_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17422..18273
DNA (852bp) protein (284aa)
hypothetical protein
Putative sporulation transcription regulator WhiA n=1 Tax=Desulfotomaculum ruminis DSM 2154 RepID=F6DNB3_DESRL (db=UNIREF evalue=3.1e-36 bit_score=157.9 identity=36.9 coverage=95.4225352112676)
(db=HMMPfam db_id=PF02650 from=98 to=275 evalue=5.2e-55 interpro_id=IPR023054 interpro_description=Sporulation regulator WhiA, C-terminal)
MG103: conserved hypothetical protein (db=HMMTigr db_id=TIGR00647 from=3 to=278 evalue=4.2e-36 interpro_id=IPR003802 interpro_description=Sporulation regulator WhiA)
AMDSBA5_14_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18486..18839
DNA (354bp) protein (118aa)
NADH-quinone oxidoreductase subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8TYI8_9FIRM (db=UNIREF evalue=6.9e-46 bit_score=188.7 identity=78.0 coverage=98.30508474576271)
NADH dehydrogenase subunit A (EC:1.6.5.3)
transmembrane_regions (db=TMHMM db_id=tmhmm from=90 to=109)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
AMDSBA5_14_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18830..19345
DNA (516bp) protein (172aa)
NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit 6 n=9 Tax=Thermaceae RepID=NQO6_THET8 (db=UNIREF evalue=8.7e-58 bit_score=228.8 identity=65.0 coverage=91.86046511627907)
COMPLEX1_20K (db=PatternScan db_id=PS01150 from=121 to=137 evalue=0.0 interpro_id=IPR006138 interpro_description=NADH-ubiquinone oxidoreductase, 20 Kd subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: quinone binding (GO:0048038), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
nuoB_fam: NADH-quinone oxidoreductase, B sub (db=HMMTigr db_id=TIGR01957 from=13 to=156 evalue=2.6e-101 interpro_id=IPR006138 interpro_description=NADH-ubiquinone oxidoreductase, 20 Kd subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: quinone binding (GO:0048038), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA5_14_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19342..19803
DNA (462bp) protein (154aa)
nuoC; NADH-quinone oxidoreductase chain c 2
NAD(P)H-quinone oxidoreductase subunit J n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=NDHJ_PROM4 (db=UNIREF evalue=6.5e-12 bit_score=76.3 identity=45.1 coverage=51.94805194805194)
COMPLEX1_30K (db=PatternScan db_id=PS00542 from=110 to=131 evalue=0.0 interpro_id=IPR020396 interpro_description=NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Biological Process: oxidation-reduction process (GO:0055114))
NuoC_fam: NADH (or F420H2) dehydrogenase, su (db=HMMTigr db_id=TIGR01961 from=29 to=149 evalue=8.7e-65 interpro_id=IPR010218 interpro_description=NADH dehydrogenase, subunit C GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA5_14_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19815..21023
DNA (1209bp) protein (403aa)
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase 49 kDa subunit n=2 Tax=Nyctotherus ovalis RepID=NDUS2_NYCOV (db=UNIREF evalue=8.9e-53 bit_score=213.4 identity=31.7 coverage=97.27047146401985)
NuoD: NADH dehydrogenase (quinone), D subuni (db=HMMTigr db_id=TIGR01962 from=16 to=402 evalue=8.9e-240 interpro_id=IPR010219 interpro_description=NADH dehydrogenase I, subunit D GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Biological Process: oxidation-reduction process (GO:0055114))
NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT (db=HMMPanther db_id=PTHR11993 from=13 to=402 evalue=6.1e-191)
AMDSBA5_14_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21020..21499
DNA (480bp) protein (160aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
NADH dehydrogenase subunit E n=2 Tax=Sulfobacillus acidophilus RepID=G8TYI4_9FIRM (db=UNIREF evalue=9.0e-57 bit_score=225.3 identity=70.4 coverage=96.875)
seg (db=Seg db_id=seg from=115 to=127)
nuoE_fam: NADH-quinone oxidoreductase, E sub (db=HMMTigr db_id=TIGR01958 from=8 to=154 evalue=4.8e-51 interpro_id=IPR002023 interpro_description=NADH:ubiquinone oxidoreductase, 24kDa subunit GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: NAD binding (GO:0051287), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA5_14_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21496..22788
DNA (1293bp) protein (431aa)
NADH dehydrogenase subunit F (EC:1.6.5.3)
NADH dehydrogenase subunit F (EC:1.6.5.3)
NADH dehydrogenase (Quinone) n=1 Tax=Clostridium lentocellum DSM 5427 RepID=F2JSY1_CELLD (db=UNIREF evalue=5.3e-104 bit_score=383.6 identity=44.4 coverage=97.21577726218096)
seg (db=Seg db_id=seg from=173 to=182)
AMDSBA5_14_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22769..25093
DNA (2325bp) protein (775aa)
NADH dehydrogenase subunit G (EC:1.6.5.3)
NADH dehydrogenase subunit G (EC:1.6.5.3)
NADH dehydrogenase subunit G n=2 Tax=Sulfobacillus acidophilus RepID=G8TYI2_9FIRM (db=UNIREF evalue=5.6e-253 bit_score=879.4 identity=57.3 coverage=95.74193548387096)
AMDSBA5_14_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25090..26079
DNA (990bp) protein (330aa)
NADH dehydrogenase subunit H (EC:1.6.5.3)
NADH dehydrogenase subunit H (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit H 2 n=2 Tax=Sulfobacillus acidophilus RepID=G8TYI1_9FIRM (db=UNIREF evalue=5.2e-152 bit_score=542.7 identity=81.7 coverage=98.48484848484848)
transmembrane_regions (db=TMHMM db_id=tmhmm from=309 to=328)
AMDSBA5_14_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26206..26643
DNA (438bp) protein (146aa)
nuoI; NADH dehydrogenase I subunit I
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=55 to=66 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=100 to=111 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
NuoI: NADH-quinone oxidoreductase, chain I (db=HMMTigr db_id=TIGR01971 from=11 to=138 evalue=3.8e-47 interpro_id=IPR010226 interpro_description=NADH-quinone oxidoreductase, chain I GO=Cellular Component: membrane (GO:0016020), Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA5_14_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26658..27230
DNA (573bp) protein (191aa)
NADH dehydrogenase subunit J
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BTQ5_9GAMM (db=UNIREF evalue=4.0e-11 bit_score=73.9 identity=31.7 coverage=93.19371727748691)
transmembrane_regions (db=TMHMM db_id=tmhmm from=139 to=161)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=115)
AMDSBA5_14_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27227..27529
DNA (303bp) protein (101aa)
NADH dehydrogenase subunit K (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K n=2 Tax=Sulfobacillus acidophilus RepID=G8TYH8_9FIRM (db=UNIREF evalue=7.2e-36 bit_score=155.2 identity=77.1 coverage=94.05940594059405)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=24)
seg (db=Seg db_id=seg from=9 to=21)
AMDSBA5_14_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27589..29454
DNA (1866bp) protein (622aa)
NADH dehydrogenase subunit L (EC:1.6.5.3)
NADH dehydrogenase subunit L (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase chain 5 n=9 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=NU5M_CRYNV (db=UNIREF evalue=1.4e-108 bit_score=399.4 identity=36.4 coverage=97.58842443729904)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
Displaying items 1-30 of 50 in total

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