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AMDSBA5_16_42 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
LysR family transcriptional regulator similarity KEGG
DB: KEGG
43.2 296.0 254 3.50e-65 sth:STH1767
Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9HXU6_BORPD (db=UNIREF evalue=9.3e-24 bit_score=116.7 identity=29.7 coverage=82.42424242424242) similarity UNIREF
DB: UNIREF
29.7 82.42 116 9.30e-24 sth:STH1767
(db=HMMPfam db_id=PF03466 from=89 to=288 evalue=5.1e-40 interpro_id=IPR005119 interpro_description=LysR, substrate-binding) iprscan interpro
DB: HMMPfam
null null null 5.10e-40 sth:STH1767
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=82 to=301 evalue=5.6e-40) iprscan interpro
DB: superfamily
null null null 5.60e-40 sth:STH1767
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=112 evalue=5.7e-27) iprscan interpro
DB: superfamily
null null null 5.70e-27 sth:STH1767
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=87 evalue=1.1e-21 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 1.10e-21 sth:STH1767
(db=HMMPfam db_id=PF00126 from=3 to=62 evalue=2.5e-21 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 2.50e-21 sth:STH1767
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=87 to=201 evalue=4.5e-16) iprscan interpro
DB: Gene3D
null null null 4.50e-16 sth:STH1767
HTHLYSR (db=FPrintScan db_id=PR00039 from=39 to=50 evalue=2.4e-07 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 2.40e-07 sth:STH1767
HTHLYSR (db=FPrintScan db_id=PR00039 from=18 to=29 evalue=2.4e-07 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 2.40e-07 sth:STH1767
HTHLYSR (db=FPrintScan db_id=PR00039 from=29 to=39 evalue=2.4e-07 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 2.40e-07 sth:STH1767
HTH_LYSR (db=ProfileScan db_id=PS50931 from=1 to=58 evalue=32.761 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 3.28e+01 sth:STH1767
LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67NJ1_SYMTH similarity UNIREF
DB: UNIREF90
43.2 null 254 5.00e-65 sth:STH1767
LysR family transcriptional regulator {ECO:0000313|EMBL:BAD40752.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacteri UNIPROT
DB: UniProtKB
43.2 296.0 254 1.70e-64 Q67NJ1_SYMTH