ggKbase home page

AMDSBA5_25_5 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
LysR family transcriptional regulator similarity KEGG
DB: KEGG
33.3 294.0 168 3.90e-39 sap:Sulac_1422
Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W229_MARMS (db=UNIREF evalue=1.3e-16 bit_score=92.8 identity=22.6 coverage=91.36212624584718) similarity UNIREF
DB: UNIREF
22.6 91.36 92 1.30e-16 sap:Sulac_1422
(db=HMMPfam db_id=PF03466 from=88 to=293 evalue=5.4e-34 interpro_id=IPR005119 interpro_description=LysR, substrate-binding) iprscan interpro
DB: HMMPfam
null null null 5.40e-34 sap:Sulac_1422
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=84 to=295 evalue=3.1e-33) iprscan interpro
DB: superfamily
null null null 3.10e-33 sap:Sulac_1422
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=111 evalue=1.2e-22) iprscan interpro
DB: superfamily
null null null 1.20e-22 sap:Sulac_1422
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=87 evalue=5.2e-19 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 5.20e-19 sap:Sulac_1422
(db=HMMPfam db_id=PF00126 from=4 to=62 evalue=1.3e-18 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 1.30e-18 sap:Sulac_1422
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=164 to=259 evalue=6.8e-09) iprscan interpro
DB: Gene3D
null null null 6.80e-09 sap:Sulac_1422
HTHLYSR (db=FPrintScan db_id=PR00039 from=29 to=39 evalue=3.6e-06 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 3.60e-06 sap:Sulac_1422
HTHLYSR (db=FPrintScan db_id=PR00039 from=39 to=50 evalue=3.6e-06 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 3.60e-06 sap:Sulac_1422
HTHLYSR (db=FPrintScan db_id=PR00039 from=18 to=29 evalue=3.6e-06 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 3.60e-06 sap:Sulac_1422
HTH_LYSR (db=ProfileScan db_id=PS50931 from=1 to=58 evalue=26.142 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 2.61e+01 sap:Sulac_1422
Uncharacterized protein {ECO:0000313|EMBL:AEW04919.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob UNIPROT
DB: UniProtKB
33.3 294.0 168 1.90e-38 G8TX11_SULAD