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AMDSBA5_27_20 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA polymerase, sigma 28 subunit, SigI similarity KEGG
DB: KEGG
49.6 230.0 214 3.90e-53 tmr:Tmar_0851
Sigma factor SgiI n=1 Tax=Bacillus sp. SG-1 RepID=A6CM50_9BACI (db=UNIREF evalue=7.0e-40 bit_score=169.9 identity=38.8 coverage=94.35483870967742) similarity UNIREF
DB: UNIREF
38.8 94.35 169 7.00e-40 tmr:Tmar_0851
seg (db=Seg db_id=seg from=193 to=208) iprscan interpro
DB: Seg
null null null null tmr:Tmar_0851
spore_sigI: RNA polymerase sigma-I factor (db=HMMTigr db_id=TIGR02895 from=16 to=240 evalue=2.0e-67 interpro_id=IPR014244 interpro_description=RNA polymerase sigma-I type) iprscan interpro
DB: HMMTigr
null null null 2.00e-67 tmr:Tmar_0851
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=16 to=100 evalue=1.2e-14 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fact iprscan interpro
DB: superfamily
null null null 1.20e-14 tmr:Tmar_0851
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=25 to=230 evalue=3.7e-09 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
null null null 3.70e-09 tmr:Tmar_0851
(db=HMMPfam db_id=PF04542 from=30 to=99 evalue=9.1e-06 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
null null null 9.10e-06 tmr:Tmar_0851
RNA polymerase, sigma 28 subunit, SigI {ECO:0000313|EMBL:ADU50965.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter. UNIPROT
DB: UniProtKB
49.6 230.0 214 1.90e-52 E6SIX0_THEM7
RNA polymerase, sigma 28 subunit, SigI n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIX0_THEM7 similarity UNIREF
DB: UNIREF90
49.6 null 213 5.70e-53 tmr:Tmar_0851