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AMDSBA5_34_4 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
68.0 172.0 240 4.70e-61 sap:Sulac_1830
RNA polymerase, sigma-24 subunit, ECF subfamily n=2 Tax=Sulfobacillus acidophilus RepID=G8U074_9FIRM (db=UNIREF evalue=5.0e-61 bit_score=239.6 identity=68.0 coverage=96.57142857142857) similarity UNIREF
DB: UNIREF
68.0 96.57 239 5.00e-61 sap:Sulac_1830
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=10 to=165 evalue=3.5e-28 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
null null null 3.50e-28 sap:Sulac_1830
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=4 to=78 evalue=1.5e-15 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor iprscan interpro
DB: superfamily
null null null 1.50e-15 sap:Sulac_1830
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=97 to=167 evalue=3.7e-13 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Functi iprscan interpro
DB: superfamily
null null null 3.70e-13 sap:Sulac_1830
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=6 to=85 evalue=1.6e-12) iprscan interpro
DB: Gene3D
null null null 1.60e-12 sap:Sulac_1830
(db=HMMPfam db_id=PF08281 from=110 to=161 evalue=1.9e-12 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
null null null 1.90e-12 sap:Sulac_1830
(db=HMMPfam db_id=PF04542 from=16 to=82 evalue=2.3e-08 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
null null null 2.30e-08 sap:Sulac_1830
Uncharacterized protein {ECO:0000313|EMBL:AEW05323.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob UNIPROT
DB: UniProtKB
68.0 172.0 240 2.30e-60 G8U074_SULAD