ggKbase home page
This organism can only be binned in the context of its binning project GWA2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

AMDSBA5_109_5

Organism: S._thermosulfido._IM5

near complete RP 51 / 55 MC: 14 BSCG 51 / 51 MC: 1 ASCG 0 / 38
Location: comp(3100..3912)

Top 3 Functional Annotations

Value Algorithm Source
copA; copper-translocating P-type ATPase similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 247.0
  • Bit_score: 335
  • Evalue 1.30e-89
Predicted protein n=1 Tax=Trichoderma reesei QM6a RepID=G0RS27_HYPJQ (db=UNIREF evalue=3.0e-44 bit_score=184.5 identity=39.8 coverage=97.41697416974169) similarity UNIREF
DB: UNIREF
  • Identity: 39.8
  • Coverage: 97.42
  • Bit_score: 184
  • Evalue 2.94e-44
seg (db=Seg db_id=seg from=186 to=205) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 813
AGCGGGCCATTGTATTTTGACGTATCGGCCACGGTTATCACGCTGATTATCCTGGGCAAATATTTTGAGGCACTGGCCAAAGGCCGCACGGGCGCGGCCATTGCCGAATTATTAGCGTTGCAGCCCCACGAGGCCCGGCGCAGAACCCCTGCGGGGGTCTGGGAGACGGTGGCGACGGACAGCGTGCAAGCGGGAGACCAGATCCAAGTTCGGACCGGGGATCGAATTCCGGTGGACGGTGAGGTAGTGGAAGGTATTGGGGCAGTTGATGAAGCCATGTTGACCGGAGAGCCGATGCCCCAAGAAAAACACCCAGGGAGCGCCGTGTCGGCGGGAACCGTCAACGGGTCGACGACGCTGATCATCGAAGCGACGCGGGTAGGGCACGACACCACCTTGGCACACATTGTGCGCACCGTTGAGGAGGCGCAGGCGACGAAAGCCCCTGTGCAACGATTCGCCGACCGCGTCGCCAGTGTTTTTGTGCCCATTGTGATGGGCATTGCGCTGGTCACCCTCGGAGCGTGGGGATTGGGCACCGGCGATTGGCGCCATGCCATTTTGGCGGCGGTCGCCGTGTTGGTGGTCGCCTGTCCCTGTGCCTTGGGATTGGCCACTCCCACCGCTGTCATGGTGGGCTCCGGCGTCGGGGCCAAACGGGGCATCTTATATCGGAGTGGGGAGGCCCTGGAAAAGGTGTCGGGGGTGACCTTGGTCGCGATGGATAAGACCGGCACCTTAACNNNNNNNNGGCAATGCGGGCGGCTGAGGATGTCGCAGACACCGAGGTCTTGGGGTGGGCAGCGGCCTTAG
PROTEIN sequence
Length: 271
SGPLYFDVSATVITLIILGKYFEALAKGRTGAAIAELLALQPHEARRRTPAGVWETVATDSVQAGDQIQVRTGDRIPVDGEVVEGIGAVDEAMLTGEPMPQEKHPGSAVSAGTVNGSTTLIIEATRVGHDTTLAHIVRTVEEAQATKAPVQRFADRVASVFVPIVMGIALVTLGAWGLGTGDWRHAILAAVAVLVVACPCALGLATPTAVMVGSGVGAKRGILYRSGEALEKVSGVTLVAMDKTGTLXXXXQCGRLRMSQTPRSWGGQRP*