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SCNpilot_expt_1000_bf_scaffold_81_27

Organism: SCNPILOT_EXPT_1000_BF_Niastella_42_33

near complete RP 52 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 30446..31057

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCU2_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 44.1
  • Coverage: 204.0
  • Bit_score: 180
  • Evalue 1.40e-42
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHQ25113.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 204.0
  • Bit_score: 180
  • Evalue 2.00e-42
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 202.0
  • Bit_score: 177
  • Evalue 4.90e-42

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Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 612
ATGACATATTTAGAACTTATAAAACTGATTGATGCGAAAGACCGGCGTGGCTGGGAAAATCTGTATTTGCAATATGGCAAAAAGTTTTATGGATTTGCTATAACAAAATGGTCGTTTAATGAAGACGAGGCTTGGAATATCGTTTACCAGACTTTAGAAACTATTATCATTAAAATTGGTGATTACAGAATAGAATCACAGGAGCATTTTGACAATTTAGTTTTTAAAATATTCACAAATTTTCTGAGACAAGAATATCGAAGGCTGAAAAAAATATCCGAAGATTTTCAAATTCTATCTTATGCAGAAATGGAAATTGCTATTGAAGATGAAGTAGAAAAAAAGATTACCGGCGAAAATCTGAAGATACCCTTCGATAAGGAATTTTTTAGAGAATATTTTGAAACAGAGGAAACTGAAAGTCCAAAGATTACAGAGTTAAAAAAGGCGCTGAATAAGCTTGATCCTTTTGAAAAAGATTTGCTTTTACTTAAAGCCAATAATTTCTCATACGATGAGATAGCAAAAATGCTAAAGGTGGATAACAATCAATTAAAAGTAAAGCATCATAGGGCCAAAAACAAACTAATTAAACTATTGCAAACAATATAA
PROTEIN sequence
Length: 204
MTYLELIKLIDAKDRRGWENLYLQYGKKFYGFAITKWSFNEDEAWNIVYQTLETIIIKIGDYRIESQEHFDNLVFKIFTNFLRQEYRRLKKISEDFQILSYAEMEIAIEDEVEKKITGENLKIPFDKEFFREYFETEETESPKITELKKALNKLDPFEKDLLLLKANNFSYDEIAKMLKVDNNQLKVKHHRAKNKLIKLLQTI*