ggKbase home page

SCNpilot_expt_1000_bf_scaffold_271_13

Organism: SCNPILOT_EXPT_1000_BF_Sphingobacteriales_43_110

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 ASCG 14 / 38
Location: comp(18397..19818)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide biosynthesis protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YG96_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 28.8
  • Coverage: 466.0
  • Bit_score: 206
  • Evalue 7.20e-50
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EHQ27360.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.8
  • Coverage: 466.0
  • Bit_score: 206
  • Evalue 1.00e-49
lipopolysaccharide O-side chain biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 23.7
  • Coverage: 468.0
  • Bit_score: 97
  • Evalue 8.70e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1422
GTGAAAAATACCTTTTTCGGCAAATTGCTATCCTCCGGTCTCCAGGCTATTGCCGTGCAGGTGCTAGGTGGGGTTTTCTTTCTGGTAATAGCTGCCTACTTGTCAAAAGAGGAGATGGGCTTTATCAACTGGGCCAATGCCATGTCGGTAGTGCTAACTATGATATTAAGCTTTGGCATGGACCAGGTAGTGGTACGGAGAATAGCAGCATCTGAGAGTTCGGACTGGGCATCTGCCGCATATTTATTCCATTCATTTTTAGGATCTTGTGTAACATTTGTTATATTATTTGCATTTAAAGCCCTCTCCAACGATCATAATTATAAGATCGAGATATTACCTTGGCTTTTTGCAGCGCAGGCCTTGTTATTTTCCGCAGGCCCTTTGAAACAGCTATTAAATGCCAAGCAAAAGTTTGCTCCTTATGGCATTATTGCCATTATTAGTAATATAATAAAATTGCTTGCCGTTTACCTGTTTATCAGTGCAAATTCACTATCTATACAAGCCGTTTTAGGAATATTGATTGGATGTGCGGCTTTTGAATTTGCATGTGTCCTTTTTTATGTGATCGCAAAAGGATATTTCACATTCTACTTTAAGAAAGTAGCGTATTTTAAGTTGTTAAAAGAAGCCTTTCCACAATATATAGCTATATTGTTTGATTCGTGCCTTGCGTATGCCGATAGGATATTGCTGCTTTTGTTAAGTACCGCAATAGCATCAGGCGACTACGGTTTTGCATACAGGGCATATGAGATCGCAAAATTGCCTGTGGTGATTATCAGCCCGATCATACTGGCAAGGTTTGCCAAAATATTTATCGGCAACTCTAAATTATCAGATGAGGGAAAAAAACAAGTGCAAGGCTTGTTTACTGTAGAAATGTTCTTTGCCTGCGGGATTCCTTTACTTTTAAATATGCTGTGGAGCCCTTTGCTGGACCATTTTTATCACGGTAAATATGGAAGTGCCAACTCTTCGGAGTTCATGATCTTGTCATTATGTTTACCGTTCCAGTTTTATATCAATATACTTTGGACACTGGGCTTCGCTGCAAAACGATATAAAGAGACAACCCGCATCATTGCTACAACTGCTGTAATAAATGTGGTGCTGAATTTGATTTTTATACCACTGTATGGTGGTAATGGAGCCGCAGTGGCGTTCTTGCTGACATCGGTCATACAATTGCTGATGTACTATCATAATGTGAAAAAGCACATCATGGAATTTTCCTCCAAAGCATTTGTAGTATTTTTTGCTATTAGTATTGCTGCATATTTGGTTGCTGTGGCCGTCACCAAAGTAGTGTTGCTGCAGTTGTTGGTAGCTATAGTAATATACCTTGCGGTTAGTTTGTTATCAAAACAGTTGCAAAGAAAGCATTTGGATATTTTATTCTCTTTTCTAAAAAAATAG
PROTEIN sequence
Length: 474
VKNTFFGKLLSSGLQAIAVQVLGGVFFLVIAAYLSKEEMGFINWANAMSVVLTMILSFGMDQVVVRRIAASESSDWASAAYLFHSFLGSCVTFVILFAFKALSNDHNYKIEILPWLFAAQALLFSAGPLKQLLNAKQKFAPYGIIAIISNIIKLLAVYLFISANSLSIQAVLGILIGCAAFEFACVLFYVIAKGYFTFYFKKVAYFKLLKEAFPQYIAILFDSCLAYADRILLLLLSTAIASGDYGFAYRAYEIAKLPVVIISPIILARFAKIFIGNSKLSDEGKKQVQGLFTVEMFFACGIPLLLNMLWSPLLDHFYHGKYGSANSSEFMILSLCLPFQFYINILWTLGFAAKRYKETTRIIATTAVINVVLNLIFIPLYGGNGAAVAFLLTSVIQLLMYYHNVKKHIMEFSSKAFVVFFAISIAAYLVAVAVTKVVLLQLLVAIVIYLAVSLLSKQLQRKHLDILFSFLKK*