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SCNpilot_expt_1000_bf_scaffold_271_24

Organism: SCNPILOT_EXPT_1000_BF_Sphingobacteriales_43_110

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 ASCG 14 / 38
Location: 26469..27188

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 234.0
  • Bit_score: 262
  • Evalue 1.00e-67
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C1355 similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 236.0
  • Bit_score: 265
  • Evalue 5.10e-68
Pseudouridine synthase {ECO:0000313|EMBL:ACU58700.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 234.0
  • Bit_score: 262
  • Evalue 4.60e-67

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 720
ATGCAGATAGAGATATTATACCAGGACGATGATATGGTAGTGGTGAATAAACCAGCCGGGGTGTTGGTTATCCCTGATAGGTTTAATGATGCCCTGCCGTCGCTTAATAAAATGCTGGAAGATAAACTAGGCACTAAAATATGGGTAGTCCATCGTCTAGACCGCGACACAAGCGGGGTTATTTGCTTTGCTAAAAATGAAGAAACGCACAAATACCTTTCCGGCTTGTTCGAGAATCATGATGTAGGCAAGTTTTACGCCGGCCTGGTGGTGGGCCGCGTAGTGCCAGAGGAAGGACGCATAGAAGCGCCTATTGCTGCACATCCTGCCATCAAAGGCAAAATGGTAGTGGCAAAGAAGGGGAAACCATCTGTTACGGATTATAAGGTAGTAAGTCAATGGGCGCTGTATTCTTTGGTTCAATTCCAGATACATACCGGGCGCACTCACCAGATCCGTGTCCATATGCAGTCTATAGGGCACCCCATAGTTTGTGATGAGCTGTATGGCGACGGGCAGCCTTTTTTACTATCAAATATCAAAAAGAAATACAAACTCTCTGAAAAGGAAGAAACAGAACGTCCGTTGCTTAGCCGCCTGGCATTGCATTCTTACCGTCTTACCCTCGTAAAGCAGGATGGCACAGAAATATCGGTCGAGGCCCCTTTGCCCAAGGATATAGCTGCGACCGTTAGGCAGTTGGACAAATGGAGTAAATGA
PROTEIN sequence
Length: 240
MQIEILYQDDDMVVVNKPAGVLVIPDRFNDALPSLNKMLEDKLGTKIWVVHRLDRDTSGVICFAKNEETHKYLSGLFENHDVGKFYAGLVVGRVVPEEGRIEAPIAAHPAIKGKMVVAKKGKPSVTDYKVVSQWALYSLVQFQIHTGRTHQIRVHMQSIGHPIVCDELYGDGQPFLLSNIKKKYKLSEKEETERPLLSRLALHSYRLTLVKQDGTEISVEAPLPKDIAATVRQLDKWSK*