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SCNpilot_expt_1000_bf_scaffold_2625_13

Organism: SCNPILOT_EXPT_1000_BF_Sphingobacteriales_43_110

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 ASCG 14 / 38
Location: 16074..17237

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XXL4_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 379.0
  • Bit_score: 232
  • Evalue 7.70e-58
mechanosensitive ion channel MscS; K16052 MscS family membrane protein YnaI similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 379.0
  • Bit_score: 232
  • Evalue 2.40e-58
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ACU02268.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.6
  • Coverage: 379.0
  • Bit_score: 232
  • Evalue 1.10e-57

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1164
ATGAACACATTGCTGCAAATAGATTGGAGTAATCTCCAGACAAGAATAGGAGGGGAGCGTTTATCGAATCTCCTCCTATGTGTTGTTATCATACTGGCTACATTACTGGTCAAGAAACCTCTTGCAAAATTGATAGCGAGGTTCATAGCCAGGATCACCAACAAGTTTACAGATCAGAATCACGGTAAGGTATTCAGCGATATGCTGCAAAAGCCTTTTGAGGCCTTATTGCAGGTGATATTGTTTTACATTGCCATCAACCAGCTTAATGTATTGCTAGGCAGCTTCCTGCTGCATCGTATCAAGAACAAGCATGAAGAACTGGCAGTACGCTTTGGCGATATTGTAGACCATGTTTTTCTTTTCCTTATTATCGTCTACACCACTATACTACTGTCGCGAATTGTAGATTTTGTATATCACGTTCAAAAACAGAAAGCTACCGACGATGATAATAAGGAGCGGATGCAGTTATTGCCCATCGTTAAGGATGTAGTAAAAGTATTGCTGTGGACCATTGGCATATTCTGGATACTGGGCAGCGTATTTCATGTCAACATACCGGCACTGATCACCGGGCTGGGTATTGGTGGTGTAGCCATAGCCCTGGCAGCAAAAGAAAGCGTAGAAAACCTGTTCGCTGCTTTTACTATTCTCACAGACAAGCCATTCCAGGTAGGCGATAGTATACGACTGGGCACGCTGGAGGGCAAGATAGAACGTATTGGCTTCCGCAGTACCCGCCTTCGTACACCTGATGGGTCTGCATTCATCATTCCCAATAAAAAGCTGGTATATGAAAACCTGGAGAACCTCAGCAATCGTTTTTCAAGGCGGGTGAAACTGGTGGTAAATATCAAATATGGGGTTGCACATGCAGATCTGCAGGCATTAAATAAGCAATTGCGCGATGCCATGCTTCATACCCTATATGTGATAGAGCCTATAGAAATACTGTTAGATGGTTTTGCGGAGAATGTATTTCAGCTATCTGTTAGCTATTATGTGCAGGAGCCCCTGCCATCTGGTGCACATCTTAATGAGATAAAGCACGAGGTGAATATGAACATCTATAAAATAGTGTCCAACTATACTTCTGCCGCCCAAATAACCACTCCACCGCCTCCGCAGTTGGATGTTAACGATGCTGATGATGAAGGGTAA
PROTEIN sequence
Length: 388
MNTLLQIDWSNLQTRIGGERLSNLLLCVVIILATLLVKKPLAKLIARFIARITNKFTDQNHGKVFSDMLQKPFEALLQVILFYIAINQLNVLLGSFLLHRIKNKHEELAVRFGDIVDHVFLFLIIVYTTILLSRIVDFVYHVQKQKATDDDNKERMQLLPIVKDVVKVLLWTIGIFWILGSVFHVNIPALITGLGIGGVAIALAAKESVENLFAAFTILTDKPFQVGDSIRLGTLEGKIERIGFRSTRLRTPDGSAFIIPNKKLVYENLENLSNRFSRRVKLVVNIKYGVAHADLQALNKQLRDAMLHTLYVIEPIEILLDGFAENVFQLSVSYYVQEPLPSGAHLNEIKHEVNMNIYKIVSNYTSAAQITTPPPPQLDVNDADDEG*