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SCNpilot_expt_1000_bf_scaffold_504_24

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 1 ASCG 12 / 38
Location: comp(28382..29695)

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BT2_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 437.0
  • Bit_score: 594
  • Evalue 1.10e-166
  • rbh
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 437.0
  • Bit_score: 594
  • Evalue 3.60e-167
  • rbh
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ABD86154.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 437.0
  • Bit_score: 594
  • Evalue 1.60e-166

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
ATGGATATCGATCAGATTGGCCGCTGGCTGCTCAACGGTAAAACGATCATCGGGGCCGAGATCACCTCGCCGGGATTCTTTCTGCAACTCGGCCTGATCCTCATCGGGGCTGGACTGGCCTTCGTTGTCTGGACCGCTATCCGTTCCCGTTACCGAACGTCTTCGATGGCGATGGGTTGGCCGAACGCGGCTCGACGGCTTGTTCGCATTCTGATCGACAGCGCGCCGATTGCCATCTTCGCGGTGCTAATGCTGCTCACACGCTTCGTCATGCTGTCGATGACGTGGCCGAGCCACAGCTATCTGCTCCCGGTTGCCGCCAAACTGGCCTTTGCCTGGCTGATCATCCGGCTTGCCACCAGCGTCATCCGCAACGCGCTGGCGGTCCGAGTGATCTCGATCGCCGCCTGGTGCGTCGCGGCTCTCAGCATTCTCGGCCAATTGCAGCCAACCATGGAGGCCCTCGACTCGGTCGCCATCGTGATCGGCGGCCTGCGACTGACGCCGCTGCTGATCATCAAGGCGACCGTGCTGCTGGCCGCAGCATTGTGGGCGTCGAATTTCGTCAGTCACTTTCTCGAAAACAGTGTAGCGCGATCGACCGACCTGACGCCCTCGATGCAAGTGCTGCTGATCAAGCTGATCCGCGTCGTGCTGATGGTGGTCACAGTGGCCCTGGTGCTGGGGGCCGTCGGCATCGATCTTTCGGCGCTGGCCTTCTTCTCCGGCGCGGTGGGCGTCGGCATCGGCCTCGGTCTGCAGAAGATCGTCGCCAACTTCATCAGCGGCATTATCCTGCTCGTCGACAAGTCGGTGAAGCCCGGCGATCTCGTGACCGTCGGCGACAGTTTCGGCCGCATCAATGCGATGAAGACACGCTATATCTCAGTCGCTGCGGGTGACGGCCGCGAGTTTCTGATCCCGAACGAGGATATGGTCACGCAGAAGGTGGTGAACTGGACCTACACCGACAAGAACACGCTCGTGAAGGTCAAGTTCAGCACCAACTACGATGCCGACCCCCGCGTTGTCTGCAGATTGGCGGTCGATGTGGCGACCAAGACGCCACGCGTCACCGATATGAAGCCGCCGGGCTGCCTGCTGACGGAGTTCGGCGACTACGGCATGCAATTCGCTCTGACATTCTGGATCTCCGACCCGGATGCCGGCATGGACAATGTGCGGAGCGACGTCATGCTGGCACTGTGGGAAGCTTTCAAGCGTGAGGGCATCCGCGTGCCCTATCCGGTGCGCGACATTCGGATTCGCGGCGGTGCACTGCCCGTCGAACCGATAACCGATGCGCCCGGCTGA
PROTEIN sequence
Length: 438
MDIDQIGRWLLNGKTIIGAEITSPGFFLQLGLILIGAGLAFVVWTAIRSRYRTSSMAMGWPNAARRLVRILIDSAPIAIFAVLMLLTRFVMLSMTWPSHSYLLPVAAKLAFAWLIIRLATSVIRNALAVRVISIAAWCVAALSILGQLQPTMEALDSVAIVIGGLRLTPLLIIKATVLLAAALWASNFVSHFLENSVARSTDLTPSMQVLLIKLIRVVLMVVTVALVLGAVGIDLSALAFFSGAVGVGIGLGLQKIVANFISGIILLVDKSVKPGDLVTVGDSFGRINAMKTRYISVAAGDGREFLIPNEDMVTQKVVNWTYTDKNTLVKVKFSTNYDADPRVVCRLAVDVATKTPRVTDMKPPGCLLTEFGDYGMQFALTFWISDPDAGMDNVRSDVMLALWEAFKREGIRVPYPVRDIRIRGGALPVEPITDAPG*