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SCNpilot_expt_1000_bf_scaffold_53_3

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(1883..2398)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MarR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4I3_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 161.0
  • Bit_score: 115
  • Evalue 6.10e-23
Transcriptional regulators {ECO:0000313|EMBL:GAO55106.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 155.0
  • Bit_score: 119
  • Evalue 5.90e-24
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 161.0
  • Bit_score: 115
  • Evalue 1.90e-23

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGCCCGCTTCCCCGCCCGAAGACGCCTCCTCTGAACCGGCCGCCGCCGCATCCGAAGATGGCCTGACCGACCTGCTGATTAGCCTGCTCAAATTGTGCAGCCTGATCGGCGATCCGATGAAGGTCGGGGTATGCGATCCCTTCGCCGCTTCCACCAACGAGGTGAAGGTGCTGATGGCGCTGGCCGGTGAAGGACCGCTGGCCGGGCATGATCTGGTGCATATTACCGCCATGTCTGCGATGAATGTCAGCCGGGCAATCGCGGGGTGCAAGGCGCGCGGCTGGGTGGAGGATTTCAACGACCCGGAAAACCGCCGCCGCCGCCCGGTGCGCCTGACCGAGGATGGCGAGGCGACCTATCGCCGGATGCAGCCGATGCTGCACGGCGTGGCTGAGAGCCTGCTGGGCAAACTGACGGTGAGGCAGCGGCGGGAAATGGGGCATTTGACCGATCTGGTTCTGCGCCGCATCGCCGAATGGGAAGCAGCGCAGCCTCAGGATCAGGCCGGTTCCTGA
PROTEIN sequence
Length: 172
MPASPPEDASSEPAAAASEDGLTDLLISLLKLCSLIGDPMKVGVCDPFAASTNEVKVLMALAGEGPLAGHDLVHITAMSAMNVSRAIAGCKARGWVEDFNDPENRRRRPVRLTEDGEATYRRMQPMLHGVAESLLGKLTVRQRREMGHLTDLVLRRIAEWEAAQPQDQAGS*