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SCNpilot_expt_1000_bf_scaffold_337_4

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 4825..6330

Top 3 Functional Annotations

Value Algorithm Source
Pilus assembly and synthesis protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8U2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 457.0
  • Bit_score: 530
  • Evalue 1.40e-147
Pilus assembly and synthesis protein {ECO:0000313|EMBL:EGD59315.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 457.0
  • Bit_score: 530
  • Evalue 1.90e-147
TraH family protein; K12072 conjugative transfer pilus assembly protein TraH similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 484.0
  • Bit_score: 352
  • Evalue 2.10e-94

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1506
ATGCTGCGTGCGCTTTGGCAAGGTTGGAAGCGTCGCCGCCAGCGTGAGGTGCGGGAGCGGGCGGGATCGCGAACACGGGCGCGGTTGCGGGCAGGGAAGGGTCCGCGTTTTGGCGCCGTGCTGGCGTTGCTCGCCGCCTTCAATCTCGTCTGGATCGATGTCGCGCAGGCTGACGTCAATTCCGAGCTCAATGGCTTTTTCAACGGGCTGGGGGGAGCCGCCAATGTCAGCGGTCCGGCGGCCTATAATGGGCAATTGGGCGGCTATTACACCGGCGGCCATATCTGGGCGCGCGTGCCGCAAACCGAATTGACCCTCGGCTCGCTGCAGCTCCCCAGCGTCAAGGCCGGCTGCGGGGGGATTGATCTGTTCACCGGGGGCTTTTCTTTCATCAATTCCGACCAGCTGGTGGCCGCCGGCAAGGCGGTCGCCAATGGCGCGCTGATGTTTGTCTTCCAGCTGGCACTCAAATCGATCAGTTCGCTGATTGATTCCACCCTGATGGACAATCTCCAGAAGCTTCAGCAGATGATCCAGCAGAGCAAGAGCTCGTGTGAACTGGGCGCCACGGCGGCGGCCGGGCTGATGGGCAGCGTCGGCATCCGCAATTCGCAGATGTGCAAGATGATCGGCAATGCCCAGGGCTTCTTTGCCGACTGGGCCAAGGGCGAGCAGGATTGCGGCAATGGCGGGCAGACCGCCGGCACCCTGCGGCGTAATAGCGACGTGAGCATCCCGTCCAAAAGCTACAATTACACCTGGGCGAGCCTGAGCCAGAGCTACCCCAATTTTGATGCGGGCTTTAAGCAATATCTGATGTCGCTGGTCGGCACCGTCATCTACACCGCGCCTGCCAGTGACACCTCGACCGGCAGCTTTGCCTTTCTGGGTGGGGGTGATGATGCCCTTATCACCGCGCTGCTCGACGGTGGTTCGGGGGCAAAAGTCTATAGCTGCGGTGGGGACGCGGATTGCCTGAGCCCCAGCCTGCAGAGCGTGACCATATCGAATTCTGTCGCGCTCAAGCCCCGGGTTTACGCGCTGGTGAGCGATATTCGCGCCCGGATGATGGCCGAGCAGAGCCTGACCAGCGAGGAAATCGGTCTGCTCGGCGCGACCTCGATCCCGCTCTACAAGATCCTGATCGTCGATGCCGCCGCCAGCTATGGCAATCTCATGCAGGCCGATCTCTATGCGCTCTCCGAAGCCGTGGCGACCGATCTGCTCGAGACGGTGACACGCAAATTCATCCAGCAGGTGGTGGCAGCCCAGGGCAGCTTCCAGAATGCTGACGACAAGTCGATGGCGCAGTGGCGCGCCCAGCTCGACAGTGTGGCCCGCGCCATCGAGACGCAGGCCCAGGCCAATGGCGCGCGGGTCCAGCGCGCCCAGATCCTTGTCGAGCGCGCGCAAAAGATCGAGGCGACCCTGCGCAACCAGATGGCCCCGCAAATGTCGGCCGCCCTCCAGTTCGACCGTTCGCTGCGCACCTCGATGAGCCGTTAG
PROTEIN sequence
Length: 502
MLRALWQGWKRRRQREVRERAGSRTRARLRAGKGPRFGAVLALLAAFNLVWIDVAQADVNSELNGFFNGLGGAANVSGPAAYNGQLGGYYTGGHIWARVPQTELTLGSLQLPSVKAGCGGIDLFTGGFSFINSDQLVAAGKAVANGALMFVFQLALKSISSLIDSTLMDNLQKLQQMIQQSKSSCELGATAAAGLMGSVGIRNSQMCKMIGNAQGFFADWAKGEQDCGNGGQTAGTLRRNSDVSIPSKSYNYTWASLSQSYPNFDAGFKQYLMSLVGTVIYTAPASDTSTGSFAFLGGGDDALITALLDGGSGAKVYSCGGDADCLSPSLQSVTISNSVALKPRVYALVSDIRARMMAEQSLTSEEIGLLGATSIPLYKILIVDAAASYGNLMQADLYALSEAVATDLLETVTRKFIQQVVAAQGSFQNADDKSMAQWRAQLDSVARAIETQAQANGARVQRAQILVERAQKIEATLRNQMAPQMSAALQFDRSLRTSMSR*