ggKbase home page

SCNpilot_expt_1000_bf_scaffold_337_28

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 33115..33948

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2JSM0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 241.0
  • Bit_score: 238
  • Evalue 1.00e-59
GntR family transcriptional regulator {ECO:0000313|EMBL:KFC70947.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 248.0
  • Bit_score: 257
  • Evalue 1.70e-65
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 241.0
  • Bit_score: 238
  • Evalue 3.20e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
GTGAGTCCCCCAAAGCAACCAGATGAGCCGCATGGTTCGGCCGGTCCGGCCTACAAGCAGATCCAGACCTATATTCAGGAACTTCTGGACAGCGCTGATTATAATCCTGGAGACCGAATCCCTTCGGAGCGCGCCTTGGCTGAGCAACTCGGTCGGAATCGGATGACCGTGCGCAAAGCGATTGAAGGCTTAATTACGATGGGCCTGCTGGAGCGGAACAGTACCAGCGGCACGCGCATTCCAGTGCCACGCGTAACACGTCCGATCGATTCGTCGTTTGGTTCCCAAGGTATTCGCCGAATCATTCAAGCGGGTGGCGGAACGGCAGGCAATAAGCTTCTTCACTTTGAGCAAGCCAAAGCCTCTTCAAAGGTCGCAGACCGCCTGAAACTGGAGGTTGGGGCGGATATTGTGATGTTCCGGCGTCTGTGGACTGCCAATGATATCCCAGTTTGTATCGAAACCAGCCACCTTCCGCTCGCGTTGGTGCCTGATCTGGCGGCGCAGGACTTGATGGGTGGTGAGTCGTTCTACAGCCTGCTTCACAGCAGGTACGGCATTGGCGCCATGCGCGGAGATCGTGAGATTGGTGTTACAACCTGCAACGAGATGGAGGCGCGGTTATTGGATCTGGGCGTAGGTACAGCCTGTCTTTCTCTGCAATTACAGGTGCATGACGAGGCGGGGCGGCCAATCGAATATATGCGCTCGGTCAATCATCCCAAGCTAGTGGTCTTCAAGACCGGTCAGATCGACCTGTCTACACCAGATCACTCAGAAAATGCGGCGAATCGGGAGGCCATTTCCGAATTTGGTTTATCTACCTTGGTTTAA
PROTEIN sequence
Length: 278
VSPPKQPDEPHGSAGPAYKQIQTYIQELLDSADYNPGDRIPSERALAEQLGRNRMTVRKAIEGLITMGLLERNSTSGTRIPVPRVTRPIDSSFGSQGIRRIIQAGGGTAGNKLLHFEQAKASSKVADRLKLEVGADIVMFRRLWTANDIPVCIETSHLPLALVPDLAAQDLMGGESFYSLLHSRYGIGAMRGDREIGVTTCNEMEARLLDLGVGTACLSLQLQVHDEAGRPIEYMRSVNHPKLVVFKTGQIDLSTPDHSENAANREAISEFGLSTLV*