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SCNpilot_expt_1000_bf_scaffold_22_25

Organism: SCNPILOT_EXPT_300_BF_Sphingobacteriia_47_13

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 11 / 38
Location: comp(29411..30370)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, AraC domain n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C4L2_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 37.3
  • Coverage: 319.0
  • Bit_score: 222
  • Evalue 5.00e-55
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 319.0
  • Bit_score: 222
  • Evalue 1.60e-55
Helix-turn-helix, AraC domain {ECO:0000313|EMBL:ADZ81006.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 319.0
  • Bit_score: 222
  • Evalue 7.10e-55

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Taxonomy

Sphingobacterium sp. 21 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 960
ATGTTCCACATACAAGGCAAAGAATTTATTGAACTCATTCCCCGCTCGTTTGGCGGTAACCTGGCTATCTGCGAGTCAACATCCCATCATCCGGGTTATTTTAGCTCCTCCACCTGCACGACCAGGAATGAATATTTTGATATTCTTTATTTCACTTGCCGGTTTTATCAGGACATTCGTGTCAATGCGTTGGAAGACATAACGCATGTCAGCCTTCACTTTCAGCTTCGCGGCCATTCCGACGCGCGTATCTCCGGGCTAAATCAGCCGCTGGGCATGAAACCGAACGTTCATAACCTGTTGAATTGCGTAGCGCCTGTAAGCGACTTTATCTTTCCCCAACAGGACCACTATGAATACATTTGCGTCGGTCTTAAACCATCCTTCTTTCAATCAATACTCGAGGGATGCGGGGAGATCGGTGATGAGCTGCTGAGGAATGCTGCTCATCAAAAACCGTTTGGCCTTTTTAAAGAAAGCATGGCCACCGATTTTCACCAATTACAGGTACTGCGGCAACTAAAAGACGCACCCATCGCCGACTCGCTAAAACCTGCTTTCCTCCTTTCCAAGGTTCGCGAGCTTACCTTGTTGACGTTGGGAAAATCTTCTAATCCGGACGCTATAAGCGGGTTAAACAAAGAAGACATAACCCGGCTATATGCTGTACGGGAATACCTTTCGCTGAATTTCCTGCAGGCGCATAGCCTGGAGAAGATCAGCCGCACTTTTCTCCTGAATGAATTTAAACTCAAGGCGGGTTTTCGTAAACTGTTCAATACAACCGTTTTTGGGTTCATCCATGAGCTACGGATGAATCATGGACTGGAGCTGATACAGGCTGGCGGGTACTCGATCGCCGATATCTCCATTAAGCTGGGCTATGAAAGCGAATCTTCGTTTAGGCGTGCCTTCAAATTATTCTTCGGAATGAGTCCTGCTGCGGTTAAAAAAGGATGA
PROTEIN sequence
Length: 320
MFHIQGKEFIELIPRSFGGNLAICESTSHHPGYFSSSTCTTRNEYFDILYFTCRFYQDIRVNALEDITHVSLHFQLRGHSDARISGLNQPLGMKPNVHNLLNCVAPVSDFIFPQQDHYEYICVGLKPSFFQSILEGCGEIGDELLRNAAHQKPFGLFKESMATDFHQLQVLRQLKDAPIADSLKPAFLLSKVRELTLLTLGKSSNPDAISGLNKEDITRLYAVREYLSLNFLQAHSLEKISRTFLLNEFKLKAGFRKLFNTTVFGFIHELRMNHGLELIQAGGYSIADISIKLGYESESSFRRAFKLFFGMSPAAVKKG*