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SCNpilot_expt_1000_bf_scaffold_138_4

Organism: SCNPILOT_EXPT_1000_BF_Xanthomonadales_66_270

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(2250..4106)

Top 3 Functional Annotations

Value Algorithm Source
polysaccharide deacetylase; K11931 biofilm PGA synthesis lipoprotein PgaB [EC:3.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 632.0
  • Bit_score: 611
  • Evalue 4.00e-172
  • rbh
Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XLG0_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 637.0
  • Bit_score: 618
  • Evalue 1.00e-173
  • rbh
Hemin storage protein {ECO:0000313|EMBL:EYR70053.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 600.0
  • Bit_score: 618
  • Evalue 1.10e-173

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1857
ATGCGCCGACTGCTGGCTTTGCTCGGCTTCGTCGCGCTGCTCGTGACCGCGCCGGCGCAGGCGCTGTTCGTGCTGTGCTACCACGACGTGCGCGATGCGGTCGACGGCGAGCTCGATGCCGATCGCGCGGCGATCAGCACGCGGCATCTGGTCGACCATTTCGAATGGCTCAAGGCGCACGGCTACGTGCCGGTCAGCCTGGAGCAGGTGCTGGCCGCGCGCGACGGCGGCGCCGTATTGCCCGAACGCGCGGTGCTGCTGAGCTTCGACGACGGTCTCGCCAGCGTCGCCACGCGCGTGCTGCCGCTGCTGCGCGCGTACCGCTATCCGGCCATGGTCGCCGTGGTCGGGCACTGGCTGGACCTGCCGCCCGGCGAAAATGTCGACTACGCCGGCGAAGCCGTGCGGCGCGAGGATTTCCTGAGCGCGGCACAGCTGCGCGAACTGGTCGATTCGGGCCTCGTGGAAATCGCCTCGCACAGCTACGACCTGCATCGCTCGGTGCCGGCCAATCCGCAGGGCGGCCAGTCGCCGGCGGTGACGACGCGGCAGTGGAACGGTGCGCAGGGTTATGAAACCGAGGCGCAGTGGCAGGCGCGCATCCGCGCCGACCTCGCGCGCAGCGCCGAGCAGATCCGCCGCCTGACCGGCCGCGCGCCGCGCGCTATCGTCTGGCCCTATGGCGCGCACAGTCGGGCCAGCGACGCGATCGCGGCCGAACTGGGCATGCGTGCCGCGTTCAGTCTGCACGGCCTGGAGCAGTCGCTGGCCGGCGACGACGCCTATGCGCGGCTGCTCATCGACGCCAATCCCAGCGCGGCGATGCTCGCCGCGGAACTGCGCAAGGACGGCGGCGAGCCGCGGCCGCTGCGCAGCGTGCAGATCGATCTCGACGCGGTCTACGACCCCGACGAGCGGCAGCAGGCGCGCAACCTCGACGCGCTGCTCGAACGCGTGCGCGCGCTCGGCGTCAACCAGGTGTGGCTGCAGGCGTTCGCCGATCCCGACGGCGACGGCGCTGCCGATGCGGCGTATTTCCCGAACCGGCATCTGCCGATGCGCGCGGATCTGTATTCGCGCGTGGCCTGGCAGCTGCGCTCGCGCGCCGGCGTGGAAGTGTTCGCCTGGATGCCGGTGCTCGGCTTCGTGCTGCCGGATGCGGCGCAACAGCGGCGTCTCGCGATCACCGCGGCGAGCCACGACGGCCGTACCGATCCGCCGCGGCTGGATCCGTTCTGCGCCGATACGCGGCGCATCGTCGGCGACGTCTACGAAGACCTCGCCGCTGCGGGCTACATGGCCGGCCTGCTGTTCGGCGACGACGCGGTACTGCGCGACGACGACGGTCTGGCGACCGATGCGCCGGCGCCGGGCCGCGCGCGCACCGACGCGCTGATCGGCTTCACCGCGGAGCTGGTCCGCCGCGCCGCGCGCTGGCGGCCGAACCTCAAGACCGCGCGCAACCTGTTCGCCGAGCCGGTGCTGGACCCGGTCGCCGAACGGCATACGGCGCAGGATCTGACGCGCTTCGCCGCGAGCTACGACCTCGTGGCAGTGATGGCCATGCCCGAGCTCGAGAATGCCGCCGATTCCGACACGTGGCTCGCGCGGCTGGCCGAAGCCGTCGCGCGCGACCGCACGACGCTGCTGCACACGGTGTTCGAGCTGCAGGCGCGCGACTGGCGCAGCGGCAAGCCGATCGGTGCCGCGCGGCTGGCGTCGCGCCTGCGTCTGCTGCAGCAGCACGGCGTGCGCCATCTGGCCTATTACCCCGACGACTTCCTGCGCGACGAGCCCGCGCTGGAAACCACGCGCGCCGCGATCTCGGCGTCCGAACATCCGTACCGGCGCAAGTAG
PROTEIN sequence
Length: 619
MRRLLALLGFVALLVTAPAQALFVLCYHDVRDAVDGELDADRAAISTRHLVDHFEWLKAHGYVPVSLEQVLAARDGGAVLPERAVLLSFDDGLASVATRVLPLLRAYRYPAMVAVVGHWLDLPPGENVDYAGEAVRREDFLSAAQLRELVDSGLVEIASHSYDLHRSVPANPQGGQSPAVTTRQWNGAQGYETEAQWQARIRADLARSAEQIRRLTGRAPRAIVWPYGAHSRASDAIAAELGMRAAFSLHGLEQSLAGDDAYARLLIDANPSAAMLAAELRKDGGEPRPLRSVQIDLDAVYDPDERQQARNLDALLERVRALGVNQVWLQAFADPDGDGAADAAYFPNRHLPMRADLYSRVAWQLRSRAGVEVFAWMPVLGFVLPDAAQQRRLAITAASHDGRTDPPRLDPFCADTRRIVGDVYEDLAAAGYMAGLLFGDDAVLRDDDGLATDAPAPGRARTDALIGFTAELVRRAARWRPNLKTARNLFAEPVLDPVAERHTAQDLTRFAASYDLVAVMAMPELENAADSDTWLARLAEAVARDRTTLLHTVFELQARDWRSGKPIGAARLASRLRLLQQHGVRHLAYYPDDFLRDEPALETTRAAISASEHPYRRK*