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SCNpilot_expt_1000_bf_scaffold_108_26

Organism: SCNPILOT_EXPT_1000_BF_Leifsonia_70_320

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 31778..32428

Top 3 Functional Annotations

Value Algorithm Source
Putative two-component system response regulator n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CMZ0_CLAM3 similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 225.0
  • Bit_score: 278
  • Evalue 5.20e-72
putative two-component system response regulator similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 225.0
  • Bit_score: 278
  • Evalue 1.60e-72
Putative two-component system response regulator {ECO:0000313|EMBL:CAN00426.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 225.0
  • Bit_score: 278
  • Evalue 7.30e-72

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGACGCGCGTGCTGCTCGTCGACGACCAGACCCTCGTGCGCACCGGCTTCCGCGTGATCATCGACGCCCAGCCGGACCTCGAGGTCGTGGGCGAGGCGGGCGACGGGCACGAGGCGATCGCCCGCGTCGCCGAGCTCGAGCCGGATGTCGTGTGCATGGACGTGCAGATGCCCGGGCTCGACGGGCTCGAGGCGACGCGGCGCATCGTGGCGGGAGACGGGGCGCCCGCGGTGCTCGTGCTCACCACCTTCGACCGCGACGACTACCTCTTCCAGGCGCTCGAGGCGGGCGCATCCGGGTTCCTGCTGAAGACGGCGAGCCCCGAGCAGCTCGTCGACGCGGTGCGCGTGCTCGCGGCGGGCGACGCGCTGCTCTCCCCCGCCGTGACCAGGCGCGTGATCGAGCGGTTCGGGGGTGCCGCATCCGGTGCAGCCGTCGCCGACCCCGCGCTTGAGGAGCTCACCGAGCGCGAGGCGGAAGTGTTCCGCCTGCTCGCCGACGGGCTCTCCAACGCCGAGATCGCCGGCCGGCTGTACGTGGGCGAGGCGACCGTGAAGACGCACGTCTCCAACATCCTGCTGAAGCTCGGCGTGCGCGACCGCGTGCAGGCCGTCGTGCACGCCTACCGCTCGGGCTTCGCGCGCCCCTGA
PROTEIN sequence
Length: 217
MTRVLLVDDQTLVRTGFRVIIDAQPDLEVVGEAGDGHEAIARVAELEPDVVCMDVQMPGLDGLEATRRIVAGDGAPAVLVLTTFDRDDYLFQALEAGASGFLLKTASPEQLVDAVRVLAAGDALLSPAVTRRVIERFGGAASGAAVADPALEELTEREAEVFRLLADGLSNAEIAGRLYVGEATVKTHVSNILLKLGVRDRVQAVVHAYRSGFARP*