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SCNpilot_expt_1000_bf_scaffold_233_10

Organism: SCNPILOT_EXPT_1000_BF_Leifsonia_70_320

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 9316..10314

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerD n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T570_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 298.0
  • Bit_score: 378
  • Evalue 9.70e-102
  • rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 326.0
  • Bit_score: 379
  • Evalue 4.70e-102
xerD; site-specific tyrosine recombinase XerD; K04763 integrase/recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 322.0
  • Bit_score: 376
  • Evalue 6.80e-102
  • rbh

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGCCCGCGGCTGACCCGACGCCCGAGACGGGCGTCGGCGCTGGGGGCGCGCGGAGGCCGGAAACGGCCTCCGCCCTGAGCGCCACCGCGCTCAGGCGGCAGAACGACCGCTACCTGCGTCACCTCGAGATCGAGCGCGGGCTCTCCCCGAACTCGGTGGCGGCCTACCGACGCGACCTGCGGGGGTTCCTCGAGGCGCTCGAGACCCGCGGCGTGACGGACGCGGCCGCGCTGGATGCGGACACCGTGCGCAGCTACGTCGTGAGCCTGCGCGACCGGGAGGTGCCGCTCGCCGCGAGCTCCACGGCGCGCGTGATCTCCTCCATCCGCGGGTTCACGCGGTTCCTCGTGGAGGAGGGGGTGCTGCAGGCCGACCCCGCCGAGTCGCTCATCGCGCCGAAGCTCCCGAAGCGGCTGCCGAAGGCGCTCACGCAGGCACAGGTCGAGGCGCTCCTCGCCGCGACCGATGGCGACGACCCGGTGCGGCTGCGCGACAAGGCCCTCCTGGAGCTGCTCTACGCGACGGGTGCGCGCGTCTCGGAGGCCGTGACGCTCGACGTGGACGACCTCGTGGGCGCCGAGGGCACTCCGGAGCTCATCCGGGTGATCGGCAAGGGCGACAAGCAGCGGATCGTGCCGCTCGGCTCCTTCGCGCGCGCCGCGATCGAGGCGTACCTGGTGCGGGCGCGGCCGCTGCTCGTGGCGGGTGCGCGGGCGACGCCGGCGCTCTTCGTCGGTGCTCGCGGCGCGCGCCTCAGCAGGCAGAACGCGTGGCTCATCATCCGTTCCGCGGCCGAGCGGGCGGGTCTCACGGTGGAGGTGTCGCCGCACAGCCTGCGGCACTCCTTCGCGACGCATCTGCTCGCCGGCGGAGCGGATGTGCGGGTCGTCCAGGAGCTGCTGGGCCACGCATCCGTCGCGACGACGCAGCTGTACACGCACGTGACGATCGACGGGTTGCGCGACGTGTACCAGCAGGCGCACCCGCGGGCGCGGTGA
PROTEIN sequence
Length: 333
MPAADPTPETGVGAGGARRPETASALSATALRRQNDRYLRHLEIERGLSPNSVAAYRRDLRGFLEALETRGVTDAAALDADTVRSYVVSLRDREVPLAASSTARVISSIRGFTRFLVEEGVLQADPAESLIAPKLPKRLPKALTQAQVEALLAATDGDDPVRLRDKALLELLYATGARVSEAVTLDVDDLVGAEGTPELIRVIGKGDKQRIVPLGSFARAAIEAYLVRARPLLVAGARATPALFVGARGARLSRQNAWLIIRSAAERAGLTVEVSPHSLRHSFATHLLAGGADVRVVQELLGHASVATTQLYTHVTIDGLRDVYQQAHPRAR*