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SCNpilot_expt_1000_bf_scaffold_233_14

Organism: SCNPILOT_EXPT_1000_BF_Leifsonia_70_320

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 12766..13566

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 262.0
  • Bit_score: 347
  • Evalue 2.10e-92
rsuA; RNA pseudouridine synthase; K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 250.0
  • Bit_score: 335
  • Evalue 1.80e-89
Pseudouridine synthase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBW5_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 261.0
  • Bit_score: 342
  • Evalue 3.60e-91

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Taxonomy

Microbacterium foliorum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGAGCGGCGGCCCGGACCCCGACGCCCAGCCCGAGGGCGAGCGTCTGCAGAAGGTGCTCGCGGCGGCCGGCGTCGCCTCGCGTCGCGTCGTCGAGCAGTACATCGTCGCGGGCCGCATCCGGGTGAACGACCGCGTCGCGACCGAGCTCGGCACCCGCATCGACCCCGCGACCGATCGTGTCGAGGTGGACGGCGTGCCCGTGCAGCTCGACACCGCCAAGCGCTACCTCATGCTCAACAAGCCGAAGGGCGTCGTGAGCACGATGTCCGACGAGAACGGCCGCCCCGACCTCTCGCGCTACGCCGAGCAGGCGGGGGAGCGCGTCTACAACGTGGGCCGGCTCGACGCCGAGACGACGGGCCTGCTCGTGCTGACGAACGACGGCGAACTCGCCCACGTGCTCGCGCATCCCTCGTTCGGCGTCGAGAAGACCTACCTGGCGACGGTGCGCGGCGTCGTGAAGGCGGATGCGCTGCGCCGGCTGCGCGCGGGCGTCGAGCTCGACGACGGGCCCATCTCGGCCGACCGGGTGCGCGTCGTGGGGGAGTCCTCGCGCGATCGCACGATCGTGGAGGTCACCCTGCACTCCGGCCGCAACCGGATCGTGCGCCGCATGCTCGCCGCGGTCGGGCACCCCGTGATCGAGCTCGTGCGCCGCCAGTTCGGCCCGCTGCACCTCGGCTCGCTGGGGGCGGGGCGGATGCGCGACCTCACTAAGGTGGAGGTCGGCGCGCTGCTGGCCCTCGCGCGCGACGCCGGCCGCGACGCGGCCCCGAGCCCGAAGCAGGAACGCCGATGA
PROTEIN sequence
Length: 267
MSGGPDPDAQPEGERLQKVLAAAGVASRRVVEQYIVAGRIRVNDRVATELGTRIDPATDRVEVDGVPVQLDTAKRYLMLNKPKGVVSTMSDENGRPDLSRYAEQAGERVYNVGRLDAETTGLLVLTNDGELAHVLAHPSFGVEKTYLATVRGVVKADALRRLRAGVELDDGPISADRVRVVGESSRDRTIVEVTLHSGRNRIVRRMLAAVGHPVIELVRRQFGPLHLGSLGAGRMRDLTKVEVGALLALARDAGRDAAPSPKQERR*