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SCNpilot_expt_1000_bf_scaffold_144_4

Organism: SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(3107..3619)

Top 3 Functional Annotations

Value Algorithm Source
Putative CarD family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IP95_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 176.0
  • Bit_score: 312
  • Evalue 3.40e-82
putative CarD family transcriptional regulator; K07736 CarD family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 176.0
  • Bit_score: 312
  • Evalue 1.10e-82
Putative CarD family transcriptional regulator {ECO:0000313|EMBL:BAK68076.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 176.0
  • Bit_score: 312
  • Evalue 4.70e-82

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGGCTGCTAAAGCGCTGTCCTTTGATGTCGGCGATTATGTCGTTTACCCCAAGCACGGGGTCGGTCGCGTGATCGAGCTGCAAAGCCAGAAGATCGCGGGTATCGACCTGGAACTTTATGTGCTGCGTTTCGAGAAGGAGCGCATGACGCTCCGCGTGCCGACCAACAAGGCAGAGAGCGTGGGCATGCGCAAGCTCTCGTCGGACAAGAAGACGCTCAAGGGCAAGCCCAAGGTGAAGCGCACCATGTGGTCGCGCCGCGCGCAGGAATATGAAGCGAAGATCAACTCGGGCGATCTCGTCTCGATCGCCGAGGTGACGCGCGACCTGTTCCGCGCCGACGATCAGCCCGAGCAGAGCTATTCCGAGCGCCAGATCTTCGAGGCTGCCTCCAGCCGCCTCGCCCGTGAGCTGGCCGCGATGGAGCAGGTGGACGAAGCCACCGCGCTCAAGAAGATCCTCGTCATTCTCAACGAGGCTGCGCCGAAATACGCCAAGGAGCGCACCGACTAA
PROTEIN sequence
Length: 171
MAAKALSFDVGDYVVYPKHGVGRVIELQSQKIAGIDLELYVLRFEKERMTLRVPTNKAESVGMRKLSSDKKTLKGKPKVKRTMWSRRAQEYEAKINSGDLVSIAEVTRDLFRADDQPEQSYSERQIFEAASSRLARELAAMEQVDEATALKKILVILNEAAPKYAKERTD*