ggKbase home page

SCNpilot_expt_1000_bf_scaffold_144_5

Organism: SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(3915..4253)

Top 3 Functional Annotations

Value Algorithm Source
Ferredoxin n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IP96_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 112.0
  • Bit_score: 234
  • Evalue 4.50e-59
ferredoxin; K05524 ferredoxin similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 112.0
  • Bit_score: 234
  • Evalue 1.40e-59
Ferredoxin {ECO:0000313|EMBL:BAK68077.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 112.0
  • Bit_score: 234
  • Evalue 6.30e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGACCTATGTCGTGACCGACGCCTGCATCCGCTGCAAATATATGGACTGCGTCGAAGTCTGCCCCGTGGACTGCTTCTACGAGGGCGAGAATATGCTCGTCATCAATCCCAACGAGTGCATCGACTGCGGCGTGTGCGAGCCGGAATGCCCCGCCGAGGCGATCCTGCCCGATACCGAGAGCGGGCTGGAGCAGTGGCTGGAGCTGAATGCCAAATATTCGGCGGATTGGCCCAACATCACCAGCAAGGGTGACGTCCCGGCGGATGCCGACGCGATGAAGGGCGAGAGCGGCAAGTTCGAGAAATATTTTTCGCCGGAGCCAGGCGCGGGAAGCTGA
PROTEIN sequence
Length: 113
MTYVVTDACIRCKYMDCVEVCPVDCFYEGENMLVINPNECIDCGVCEPECPAEAILPDTESGLEQWLELNAKYSADWPNITSKGDVPADADAMKGESGKFEKYFSPEPGAGS*