ggKbase home page

SCNpilot_expt_1000_bf_scaffold_411_19

Organism: SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 18974..20704

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000378FDB3 similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 576.0
  • Bit_score: 891
  • Evalue 4.50e-256
  • rbh
Cytochrome c biogenesis protein, transmembrane region {ECO:0000313|EMBL:EIZ80942.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 578.0
  • Bit_score: 837
  • Evalue 1.40e-239
cytochrome c biogenesis protein, transmembrane region similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 583.0
  • Bit_score: 754
  • Evalue 2.70e-215

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1731
ATGGTTCTCTATATCCTTGCCTATCTCGGCGGCGTCCTCACCATCATCAGCCCTTGCATCCTGCCGGTGTTGCCGTTCGTCTTTGCGCGCGCCGGGCGGCCGTTCCTGACCAACGGATTGCCGATGCTGATCGGCATGGCGCTGATGTTCATGGTGGTCGCGACATTGGCTGCCGTCGGCGGCGGTTGGGCGGTGCAGGCCAATCAATATGGCCGGATCGCCGCGTTGCTGCTGCTGGCCCTGTTCGGTCTCGCGCTGCTGCTGCCGGGGCTGGCGGACCGGCTCACCCAGCCGCTGGTCGGCTGGGGATCGCGCCTCTCCGCGCAGGCCGATGCGGGCGGATCGAGCATCGGCGCCTCGCTGCTGCTCGGCATCGCGACCGGGCTGCTCTGGGCGCCCTGCGCGGGGCCGATCCTCGGCCTCGTGCTCACCGGTGCGGCGTTGCAGGGCGCGAGCGTGGCGACGAGCCTGCTGCTGATGGCCTATGCGCTGGGCGCGGCGACATCGCTCGCGCTGGCGCTGCTGGTCGGCGGCCGGATTTTCCGCGCGATGAAGCAGTCGCTCGGCGTCGGCGAATGGGTGCGGCGCGCGGTCGGCGCGGCGGTGCTCGTCGCGGTGGCGGCGATTGCGCTGGGGGTCGATACCGGCTTTCTCTCGCGCGTCTCGCTCGCCGGCACGACGCGGGTGGAGGAAGGGCTGATGGCACGCCTCGGCATCGCCAATCCGGCGAGTCAGCAGCGCGAGGGCGAGGCCGCGACACTGGCCGACGAGGGCCCCATGCCGGCGCTCGACGGCTCGGTGACATGGCTCAACAGCCCGCCGCTGACGCGCGAAGGCCTGAAGGGCAAGGTCGTGCTGGTCGATTTCTGGACCTATAGCTGCATCAACTGCCTGCGCGCGCTGCCTTATGTGCGCGCCTGGGCGGAGAAATATGGCCGCGACGGGCTGGTCGTCATCGGCGTCCACACTCCCGAATTTGCGTTCGAGAAGGATGTCGCCAACGTCCGCAAGGCCATTGCCGATCTTGGCATCCGCTATCCCGTGGCGGTCGACAACGACTATCGCATCTGGCGGGCCTTCAGGAACAACTACTGGCCGGCGCACTATTTCATCGACGCAAACGGGCGCATCCGCCACCACCATTATGGCGAGGGCGATTATGCCGGCTCGGAGCGGGTGATCCAGCGCCTGCTTGCCGAGGCGCAGCCCGGCCGCACGTTCGAGGGCATGGTCGCCGGGGCCGTGAAGGGCGAGGGTGTGGAAGCTGCCTCGGTGTTACGCGGGCGCCGGTCGCCGGAAACCTACATCGGCTATGCGCGGTCCGAGCGCTCGGTTTCGCAGCCCGCGACCGTGCGCGACAAGCCTGCGGCCTATGAGGCGAACCCCACCGCGTTCAATCAATGGGGTCTGGCCGGCACCTGGACGGTGGGCGGCGAGAGCGCGACGCTCGGCAAGGCGGGCGGGCGCATTCTCTACCATTTTCGCGCGCGCGATCTTCATCTGGTGATGGGGCCGGGCAGAGACGGCCGTCCGGTGCGCTTCCGCGTCACCATCGACGGCAAGGCGCCCGGTGCCGATGCGGGCGTGGACGTGGATGCGGCAGGTAACGGCACGGTCGACAGTCAGCGGCTCTACCAACTCGTCCGGCTGAAGCAGGCGGGCGACGAGCATCAGTTCGTCATCGAGTTTCTGGACCCGGCTGTGGAGGCGTTCAGCTTCACCTTCGGGTGA
PROTEIN sequence
Length: 577
MVLYILAYLGGVLTIISPCILPVLPFVFARAGRPFLTNGLPMLIGMALMFMVVATLAAVGGGWAVQANQYGRIAALLLLALFGLALLLPGLADRLTQPLVGWGSRLSAQADAGGSSIGASLLLGIATGLLWAPCAGPILGLVLTGAALQGASVATSLLLMAYALGAATSLALALLVGGRIFRAMKQSLGVGEWVRRAVGAAVLVAVAAIALGVDTGFLSRVSLAGTTRVEEGLMARLGIANPASQQREGEAATLADEGPMPALDGSVTWLNSPPLTREGLKGKVVLVDFWTYSCINCLRALPYVRAWAEKYGRDGLVVIGVHTPEFAFEKDVANVRKAIADLGIRYPVAVDNDYRIWRAFRNNYWPAHYFIDANGRIRHHHYGEGDYAGSERVIQRLLAEAQPGRTFEGMVAGAVKGEGVEAASVLRGRRSPETYIGYARSERSVSQPATVRDKPAAYEANPTAFNQWGLAGTWTVGGESATLGKAGGRILYHFRARDLHLVMGPGRDGRPVRFRVTIDGKAPGADAGVDVDAAGNGTVDSQRLYQLVRLKQAGDEHQFVIEFLDPAVEAFSFTFG*