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SCNpilot_expt_1000_bf_scaffold_439_1

Organism: SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2..418)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5N4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 139.0
  • Bit_score: 270
  • Evalue 9.10e-70
Site-specific tyrosine recombinase XerD {ECO:0000313|EMBL:CEG10253.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 139.0
  • Bit_score: 270
  • Evalue 1.30e-69
putative integrase similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 139.0
  • Bit_score: 246
  • Evalue 5.80e-63

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
GTGTGGACGCCAGAGACAGCGCGGCAAGAAGCGAAGGTCCAACTGGGGCGTGTCGCGCGCGGCGACAATCCTTCGGAGGAACGTCAGCTCGATCACAAGGCCATCACGGTCAAGGAGCTTTGCGCGCTCTATACCGCTGACCTGAACGCAGGCCTCATCCTGGGCAAGGGCGGGCGACCGAAAAAGCCGACCACCATCGTCACCGACATTGGCCGCATCGAGCGGCACATCATCCCGCTGATCGGCGCACGCCGCGTCAAGGATCTTACCAAGGCCGACATCAACAAGGTCTTGAAGGACATCATGGCCGGCAAGACGCGCGTCGCCGTCAAGACGAAGAAGCTGCGAGGAAAGGCCATTGTTCGTGGTGGCGCGGGCACCGCCACGCGCACCGTCGGCCTATTGGGCGGAATCCTC
PROTEIN sequence
Length: 139
VWTPETARQEAKVQLGRVARGDNPSEERQLDHKAITVKELCALYTADLNAGLILGKGGRPKKPTTIVTDIGRIERHIIPLIGARRVKDLTKADINKVLKDIMAGKTRVAVKTKKLRGKAIVRGGAGTATRTVGLLGGIL