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SCNpilot_expt_1000_bf_scaffold_439_3

Organism: SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 2546..3043

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MarR family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P6G0_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 157.0
  • Bit_score: 233
  • Evalue 1.90e-58
MarR family transcriptional regulator {ECO:0000313|EMBL:ETR74908.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 165.0
  • Bit_score: 290
  • Evalue 1.10e-75
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 153.0
  • Bit_score: 220
  • Evalue 4.10e-55

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGTCAACAAATAAAGTGCATAATGCACATATCAAGGCGCTGTTTCCCTCCTTACATGCGTCACTGCTTGAGATCGTGACCGTGATGAACCGGCCGGAAAGGGACGATGAGTTGCTGGCGTTGGCAGGCCTGACGCTCGAGCGGGCGCTCTTCCCTCTGCTCGTGTTCGTCGAGCGCAAGGGACCGATCGGGGTCGTCGATCTCGCCGGCAGGGTTGGCCGCGATTACACGACCGTCAGTCGCCAGGTCGCGCGGTTGGAAGAACTCGGCCTCGTCGAGCGTCGTGCCGGGTCGGCGGACAAGCGCGTGCGCGAGGCAATTATCACACCCCGAGGAAAGTCGGCGACCGACGCTCTCGACACCGCCCGTGAGACTATGGCGCTGGAACTGTTCCACGACTGGTCTCACGAGGAGCTCAATGAGCTGGTGCGCCTCATGGGGAAGCTCGCCGAGGGCATGGCCAAAGAACCGGCACGGTCGAATCCAGACGCCGATTAG
PROTEIN sequence
Length: 166
MSTNKVHNAHIKALFPSLHASLLEIVTVMNRPERDDELLALAGLTLERALFPLLVFVERKGPIGVVDLAGRVGRDYTTVSRQVARLEELGLVERRAGSADKRVREAIITPRGKSATDALDTARETMALELFHDWSHEELNELVRLMGKLAEGMAKEPARSNPDAD*