ggKbase home page

SCNpilot_expt_1000_bf_scaffold_439_16

Organism: SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(13491..14237)

Top 3 Functional Annotations

Value Algorithm Source
IclR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ02_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 247.0
  • Bit_score: 354
  • Evalue 8.60e-95
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 247.0
  • Bit_score: 354
  • Evalue 2.70e-95
IclR family transcriptional regulator {ECO:0000313|EMBL:BAK67172.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 247.0
  • Bit_score: 354
  • Evalue 1.20e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGCGCAAGGCGGAGTCCTCGTCGGTCAAGTCGGCGACGCGAACGCTGGACATATTGGAATATGTGGTCGGCAGCCGCCGGCCGGTGAGTGCGGCGGAAATCGCCTCCGCGCTCGCCATTCCGGTGAGCAGCCTCTCCTACCTGCTCGCCACGCTGATCGAGCGCGGCTATCTGACGCGCAACGGCCGCTCGCACCTGCCCGGCCCGGCGCTGGCCCGGCTGCACCCGGACGAGACGGTAGGGGCGCTCAGCGACCGGGTCTATCCGGTGGTGCGGTCGGTCTCGCTCCAGTTGAACGAGACGGTCTCCTTCTTCGTGCGCCACGGTTTCGAGATGGAGGCGATCGCCGGCGAGGTGGCCCCGCAGGCGCTGCGCTACACCATCGAAGTCGGCCGGCTGGTGCCACTGCACGCCTTCGCGGCCGGCAAGGCCATCCTCGCGACATTCAGCGAGACGGAACTGGCGGACTATTTCGCGGCAGGCGGGCGTGACGTGTTCACCGACTCCACGCTAACCAGCGAGGCGGCCCTGCGCGCGGAGCTGACCGATATCGCCCACACCGGCGTTGCCCGCACGGCGGAGGAATATACGCCCGGCATCATCGGCATCGGCCGGGCGATCTGGCGGGACGGCGCACCGCTGGGCGCGATCAGCGTCGCGATTCCCGCTGCACGGACCAGCCCGGCGCTGGAAGCGCGCGCGGTGGAGCTTCTTCACCGCGCGGCGGACGCGCTGGGCAGCGGCTGA
PROTEIN sequence
Length: 249
MRKAESSSVKSATRTLDILEYVVGSRRPVSAAEIASALAIPVSSLSYLLATLIERGYLTRNGRSHLPGPALARLHPDETVGALSDRVYPVVRSVSLQLNETVSFFVRHGFEMEAIAGEVAPQALRYTIEVGRLVPLHAFAAGKAILATFSETELADYFAAGGRDVFTDSTLTSEAALRAELTDIAHTGVARTAEEYTPGIIGIGRAIWRDGAPLGAISVAIPAARTSPALEARAVELLHRAADALGSG*