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SCNpilot_expt_1000_bf_scaffold_439_18

Organism: SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(15378..17819)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIW5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 816.0
  • Bit_score: 1164
  • Evalue 0.0
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 816.0
  • Bit_score: 1164
  • Evalue 0.0
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK67135.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 816.0
  • Bit_score: 1164
  • Evalue 0.0

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2442
ATGTTGAAAACCTCATTGATGGTGCCAGCGTTGCTGCTGGCGTCCACAAGCGCTTTCGCGCAAGTCGCGAGCCAACCCGCCGCCGGCGCCGATGACGCCGACATCACGGACATCATCGTCACCGCGCAGAAGCGCGAGCAGTCGCTCCAGGATGTGAGCGCCGCCGTCAGCGCCGTAGGTGCCGACCGCCTCGCCGCCGCGCAGGTGAACAACATCTCCGACCTGCAAACCATCGTGCCGTCGGTCAACTTCGGCAGCGACTTCAACCAGGCCAAGATCTTCATCCGCGGCGTGGGCGCCAACACCTCCACCAGCGGCAGCTCCACCGGCGTCGCCCTACACGTCGACGGCGCCTATGTGGCGCGCGCCGAGGCGCAGCTCACCTCGCTGTTCGATCTGGAGCGCGTTGAGGTTCTGCGCGGCCCGCAGGGTTCGCTCTATGGCCGGAACGCGGTCGGCGGCTCGGTCAATCTCATCACCGCCAAGCCGACCCGCGATTTCAGCGGCTACGCACGGATGACCTACGGCAATTACGACCAGCTCACCTCCGAGCTGGCGATCAGCGGGCCGATCACCGAGAACATCCTGTTCCGCGTCGCCGGCAAGATGGAGAGCCGCGACGGTTTTGGCACCAATCCGGTGACGGGCGCCGATGTGGACGACCTCAAGCGCCGCATGGCGCGCGCGCAGGTGCAGTTCAACTTCACCGACGATGTGAGCCTGCTGCTCTCGGGCGAGTATTTCCGCCAGGACGACAGCTCGGGCGCGGTGCATTATCTGCGTGACTCCTTCCCGGGCGTCGCCCGCCTCGCCTCGCTGGGCGCGGGCGGCTATGCGGCCAAGCCGCGCGATCTGGCCACCGAAATCCAGCCGGGCACGGACACCAAGTCCTACAGCTTCACCGGCACGTTCCGGGCGCAGCTCTCCGACACGGTGACGCTGACCAACATTGCCAACTACCGCAACTTCAAGACCTCGCTGTTCCAGGATCTCGATCTCTCGGCAGTCGTCGACGCCTTCCCGCTCAACGGCATGCCGACCACCATCCACGAGCGGCGGATCGACAGCGAGCAGGTCAGCAACGAGTTGCAGCTCAACTACTCGTCCGACTTCGTCAACATCGTGGTCGGCGGCTATTACTTCCACGAGCGGCAGCGGCCGATCGACAATGTCGGCTATCAGCGCCGCAACGGTCTGGCCGGCAACCTCGATGTGCTGGAGCGTGACGCCGGCCTGCTGGCGGCCAAGGGCATGACCCTTGCCGACGTGTATGAGCTGTGCGGCTACGGCCCCGGCACGACGACCTCCGGCGACCTCATCGCGCCCAAGCGCGTCTGCACCAAGTCGAACCTGGGCGACACGGCTTATGCCTTCTTCGGTCAGGCCAATCTCGACTTCGGCATGTTCTCGGACAGCCTCGCCGGCGTCAGCCTGAAGCTGGGCGGCCGCTACAGCCACGAGAAGGTGACGACCGAGAACCCGTCGGTCATCGTCCGCTATGCCGGGCCGACCTTCACGCCTGCCACGGCACTGCCGACGCTGGTTTTCAACGCCGCGGACAGCCACAACGAGCGGTCGTTCAACGACTTCACGCCGGAAATCGGCCTCCAGTATCAGCCGAACCGCGATCTGCTGTTCTATTACACCTACTCGGAGGGCTTCAAGGCGGGCTCGGGCGAGAACGCCTCGAACAGCAGCACGATCGTCGACCCGGAGACGATCAAGAACCACGAGGCAGGCATCAAGGCGAGCTTCGGCCGCGTGCTGACCGTGAACCTGGCGGGCTATGCCTACACGCTCAACGGCTTGCAGCTCAACAAGACGATCGCGGGCGGGCCGACCGGCTACACCACGATCTTCCAGAACGCCGCCAAGACCCGCGCCAAGGGCATCGAGGCCGACGTACTGCTGCGCCCGGCGCGCGGCCTGCGCATCAGCGGCGCGCTCTCCTATACGGACGCGCACTTCGTCGACTATCTGACGCTCGATCCGCTGAACCCGGCCAACATCGCCGGTGGCACGCCCTATGACCCGGTGACGAACCCGGACCCGACGGCCTTTGGCGCGCCGAGCGGCGGCAACATCCAGCTTGCCGGCAACGACACGCGCAACAGCCCGCGCTGGGCGTGGAACCTCCATGGCGAGTATGACATCCGCTCGACCGTGGGCCTGTTTACGCCGAGCATCGACATCTCGTACAAGAGCCGCACCTACTTCAGCGAGTATGAGCGGGCTATCGAGAGCAGCCGGGCCTACACCATGGTCGACGCATCGCTCGCCTATGAGACGGACGATGGCCGCATCCGGGCGCAGATCTGGGCGAAGAACCTGTTCGACGTGACCCGTCCGGGCAGCACCTTCGCGCTGGCGACCGGCCGTCTGCTCGGCGTCACCTGGCTGCCGCCGCGCACCTATGGCGCGACCATCGGCTACAAGTTCTGA
PROTEIN sequence
Length: 814
MLKTSLMVPALLLASTSAFAQVASQPAAGADDADITDIIVTAQKREQSLQDVSAAVSAVGADRLAAAQVNNISDLQTIVPSVNFGSDFNQAKIFIRGVGANTSTSGSSTGVALHVDGAYVARAEAQLTSLFDLERVEVLRGPQGSLYGRNAVGGSVNLITAKPTRDFSGYARMTYGNYDQLTSELAISGPITENILFRVAGKMESRDGFGTNPVTGADVDDLKRRMARAQVQFNFTDDVSLLLSGEYFRQDDSSGAVHYLRDSFPGVARLASLGAGGYAAKPRDLATEIQPGTDTKSYSFTGTFRAQLSDTVTLTNIANYRNFKTSLFQDLDLSAVVDAFPLNGMPTTIHERRIDSEQVSNELQLNYSSDFVNIVVGGYYFHERQRPIDNVGYQRRNGLAGNLDVLERDAGLLAAKGMTLADVYELCGYGPGTTTSGDLIAPKRVCTKSNLGDTAYAFFGQANLDFGMFSDSLAGVSLKLGGRYSHEKVTTENPSVIVRYAGPTFTPATALPTLVFNAADSHNERSFNDFTPEIGLQYQPNRDLLFYYTYSEGFKAGSGENASNSSTIVDPETIKNHEAGIKASFGRVLTVNLAGYAYTLNGLQLNKTIAGGPTGYTTIFQNAAKTRAKGIEADVLLRPARGLRISGALSYTDAHFVDYLTLDPLNPANIAGGTPYDPVTNPDPTAFGAPSGGNIQLAGNDTRNSPRWAWNLHGEYDIRSTVGLFTPSIDISYKSRTYFSEYERAIESSRAYTMVDASLAYETDDGRIRAQIWAKNLFDVTRPGSTFALATGRLLGVTWLPPRTYGATIGYKF*