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SCNpilot_expt_1000_bf_scaffold_1324_24

Organism: SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(30219..30623)

Top 3 Functional Annotations

Value Algorithm Source
CopG domain protein DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU68_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 130.0
  • Bit_score: 180
  • Evalue 1.60e-42
CopG/DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 130.0
  • Bit_score: 180
  • Evalue 5.00e-43
CopG domain protein DNA-binding domain protein {ECO:0000313|EMBL:ABS63451.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 130.0
  • Bit_score: 180
  • Evalue 2.20e-42

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGAAGGTCCGGCACAACCTCTATATTGACCAGGCGGTCAGCGATGCGCTGGACGGGCTTGCGGCTAGGCCCGGCGCGACCAAAAGCGGGATCGTCAACGATGCCCTGCGCGCCTATCTCGCGCGGCGCGGCAGCAGGGAACTGGACGACCTGTTCAAGACCCGGCTCGACCGCATGTCGCGCGACATTGGCCGGCTTGCCCGTGATACCGACGTGCTCCTCGAGAGCCTGTCCCTGTTCGTCCGCTACCAGCTGACCGTCACCGCCCCGCTGCCGGAGGCGGACAGCGCGGCGCGCGCAGTGGGGCGCGAGCGCTTTGAGGCCTTCGTCGCCCAGGTCGGTCGGCAGCTTGCGGGTGGCAAGCGGTCAATCGGGCGTGATGGCGACACGGAGCAGCCGTCATGA
PROTEIN sequence
Length: 135
MKVRHNLYIDQAVSDALDGLAARPGATKSGIVNDALRAYLARRGSRELDDLFKTRLDRMSRDIGRLARDTDVLLESLSLFVRYQLTVTAPLPEADSAARAVGRERFEAFVAQVGRQLAGGKRSIGRDGDTEQPS*