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SCNpilot_expt_1000_bf_scaffold_1324_25

Organism: SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(30627..32654)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraG n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003739346 similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 676.0
  • Bit_score: 1096
  • Evalue 0.0
  • rbh
conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 675.0
  • Bit_score: 1084
  • Evalue 0.0
  • rbh
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 677.0
  • Bit_score: 1096
  • Evalue 0.0

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Taxonomy

RHI_Sphingopyxis_65_19 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2028
ATGACCCCGACCAAATTGCTTATCGGTCAGATCATCATCGTTTTCGCGATCATGATCGCAGGCCTCTGGGCCGCGACCCAGTGGGCGGCCGCGATGCTGGCCTACCAGCCGCAATTGGGAGCGCCCTGGTTTCTCCTGTTTGAGGCGCCGGTCTACCGCCCATGGCAGCTCTTCGCCTGGTGGTATCATTATGATGCCTATGCACCCCAGGTCTTCGACAAAGCCGGAATGTTGGCAGGTGTAAGCGGTTTCCTCGGCTGTGCGGCCGCGATCTTCGGATCGTTATGGCGTGCGCGTCAGCAGCGACATGTCACGACCTATGGGTCGGCGCGCTGGGCCGATCCCCGCGAGATCGACGGTGCCGGCTTGTTTGGGGATGCCGGTGTCTTCCTCGGTCGGCAGCATGCGCGCTATCTGCGCCACAATGGCCCCGAGCATGTCATGGCCTTCGCGCCGACCCGTTCGGGCAAAGGGGTGGGGCTCGTCGTCCCGACTCTGCTCAGCTGGACCGGCTCGGCCGTCATCCACGATATCAAGGGCGAGAACTGGCAGCTGACCGCCGGTTGGCGCTCACGTTTCAGCAACGCGCTGTTGTTCAATCCCACCGATGTCCGCTCGGCGCATTACAACCCGCTGCTGGAGGTTCGTCGCGGTGAGGATGAGGTCCGCGACGTTCAGAACATTGCCGATATCCTGGTCGACCCTGAAGGCGCGCTCGAGCGGCGCAACCATTGGGAGAAGACCAGCCACGCGCTGCTGGTCGGTGCGATCCTTCATGTCCTCTACGCCGAGGAGGAGAAGACATTGGCGCGGGTCGCGACCTTCCTGTCCGATCCGCAGCGCTCCTTCACCGCCACGCTGCGCCGGATGATGACCACCAATCATATCGGCACGAAGGATGCGCCGCAGGTGCATCCGGTGGTTGCCTCGGCCGCCCGCGAGCTGCTCAACAAGTCTGAGAATGAGCGCTCGGGCGTGCTCTCGACCGCCATGTCCTTTCTGGGGCTCTACCGCGACCCCACCGTCGCCGAGGTCACATCGCGCTGCGACTGGCGTATTGCCGATCTGGTCGACGCCAAGCAACCCGTCTCGCTCTATCTCGTCATTCCGCCCTCTGACATCAGCCGGACCAAGCCGCTGGTGCGCCTGGTGCTCAACCAGATCGGCCGCCGGCTGACCGAGAAGCTCGATGGCGAGGCGGGAAGGGGCCGTAGGCATCAACTCCTCATGATGCTCGACGAGTTCCCGGCGCTGGGGCGCCTCGACTTTTTCGAGACAGCGCTCGCCTTCATGGCCGGCTACGGCATTCGTGCCTTTCTGATCGCGCAGAGCCTCAACCAGATCGATCGCGCCTATGGCGAGCACAATGCGATCCTCGATAATTGTCATGTCCGCATTGCCTTTGCGACCAATGACGAACGCACCGCGCGACGAATTTCCGATGCGCTGGGCACCGCGACCGAGCAGCGCTCGATGCGCAACTATGCAGGCCATCGGCTAGCGCCCTGGCTCGCCCATGTCATGGTCAGCCGGCAGGAAACCGCCCGCCCGCTGCTGACCCCGGGCGAGGTGATGCAGTTGCCGCCGGCAGATGAACTGGTGCTCGTCTCGGGCATGGCGCCCATCAAGGCGCAGAAGCTGCGCTATTATGAGGATCACAACTTCCGCGGCCGCGTAGTCGCGCCGCCAGTGCTCGCCGAGGGCCCCTATGCCGATCGGCCCGCGCCGCGCTCCAACGACTGGGGAAGCTTCGTCCGCAAGCCCGACGCGCGTCTCGATACGCGCGATGACGGAACGGAGGCCGAGGGCACGGATGGCGGTCTCCAGCAGGAGCGTCACCCGGGCCTTGGCGAAGACAAGGGCGCACAGCCGACGGAGGTTGATCCGGATAGCGTTGTTGTCGAGCAGGAGGACGGTGATATCGCCGCGGACCAGCGGGCGATGGATCATGCACGCGGCCTGACTGCCGTTGCCCGTGGCTATGGCATCAACGAGAGCAGTGGGCGCGACCTGCTGCCCGGGTTCTGA
PROTEIN sequence
Length: 676
MTPTKLLIGQIIIVFAIMIAGLWAATQWAAAMLAYQPQLGAPWFLLFEAPVYRPWQLFAWWYHYDAYAPQVFDKAGMLAGVSGFLGCAAAIFGSLWRARQQRHVTTYGSARWADPREIDGAGLFGDAGVFLGRQHARYLRHNGPEHVMAFAPTRSGKGVGLVVPTLLSWTGSAVIHDIKGENWQLTAGWRSRFSNALLFNPTDVRSAHYNPLLEVRRGEDEVRDVQNIADILVDPEGALERRNHWEKTSHALLVGAILHVLYAEEEKTLARVATFLSDPQRSFTATLRRMMTTNHIGTKDAPQVHPVVASAARELLNKSENERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLVDAKQPVSLYLVIPPSDISRTKPLVRLVLNQIGRRLTEKLDGEAGRGRRHQLLMMLDEFPALGRLDFFETALAFMAGYGIRAFLIAQSLNQIDRAYGEHNAILDNCHVRIAFATNDERTARRISDALGTATEQRSMRNYAGHRLAPWLAHVMVSRQETARPLLTPGEVMQLPPADELVLVSGMAPIKAQKLRYYEDHNFRGRVVAPPVLAEGPYADRPAPRSNDWGSFVRKPDARLDTRDDGTEAEGTDGGLQQERHPGLGEDKGAQPTEVDPDSVVVEQEDGDIAADQRAMDHARGLTAVARGYGINESSGRDLLPGF*